|
Name : rplS (LMHCC_0771) Accession : YP_002349739.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 782155 - 782499 bp Length : 345 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAACAAACTGATTGATGAAATCACAAAAAGTCAACTAAACCCAGATGTTCCAAATTTCCGTCCGGGTGATACTGTACG TGTACATGCGAAAGTAGTCGAAGGTACTCGCGAACGTATCCAATTATTCGAAGGCGTTGTAATCAAACGTCGCGGAGCTG GAATCAGCGAAACTTTCACTGTTCGTAAAATTTCTAACAGTGTTGGCGTGGAACGTACTTTCCCAGTACATACTCCACGT ATCGCAAAATTAGAAGTTATCCGTCGTGGTAAAGTACGTCGTGCGAAACTTTACTACCTACGTAACCTACGTGGTAAAGC GGCTCGTATTAAAGAAATTCGTTAA Protein sequence : MNKLIDEITKSQLNPDVPNFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETFTVRKISNSVGVERTFPVHTPR IAKLEVIRRGKVRRAKLYYLRNLRGKAARIKEIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 9e-49 | 100 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-27 | 58 |
