Gene Information

Name : LMHCC_0709 (LMHCC_0709)
Accession : YP_002349678.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 718216 - 719148 bp
Length : 933 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAATGCTCGTTGTGGCACTTTTCGCATTAGTAGTTGTACTTGCGGGTTGTTCCAGTCAAAATAGTGATTCGAA
AAAAACAGATGGCAAGTTAAATGTAGTGGCGACTTATTCGATCTTAGCAGATATTGTTAAAAATGTTGGTGGGGACAAAA
TTGAGCTTCATAGTATTGTGCCAGTTGGTGTGGATCCGCATGAATATGATCCGCTGCCAGCCAATATTCAAAGTGCAGCA
GATGCAGATTTAATTTTTTACAATGGATTGAATTTGGAAACGGGGAACGGTTGGTTTGATCGTATGCTTGAAACTGCGGA
CAAATCAAGAGATGACAAGGAGCAAGTGGTGGAGTTAAGTAAAGGCGTAAAACCAAAATACTTAACAGAAAAAGGAAAAA
CCTCAGAAACAGACCCACATGCTTGGCTTGATCTTCATAACGGAATAATCTATACGGAAAATGTACGCGATGCCCTTGTA
AAAGCAGACCCCGACAATGCGGCATTTTACAAAGATAATGCGGCAAAATACATCGCTAAATTAGATGCATTAGATAAAGA
GGCTAAACAAAAATACGCTGATTTGCCAGAAAATCAAAAAACCTTAGTAACGAGCGAAGGGGCATTTAAATATTTTGCAG
CTCGCTACGGTTTGAAAGCAGCCTATATTTGGGAAATCAACACAGAAAGCCAAGGGACACCTGATCAAATGAAACAAATT
GTCGGCATTGTGGAAAAAGAAAAAGTGCCTAATCTATTTGTGGAAACTAGCGTAGATCCACGTAGTATGGAAAGTGTCTC
TAAAGAAACAGGTGTACCAATTTTCGCGAAAATTTTCACGGATTCGACGGCGAAAAAAGGTGAAGTGGGCGACACGTATT
TAGAAATGATGCGCTACAATTTAGATAAAATTCATGATGGTTTAGCTAACTAA

Protein sequence :
MKKMLVVALFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILADIVKNVGGDKIELHSIVPVGVDPHEYDPLPANIQSAA
DADLIFYNGLNLETGNGWFDRMLETADKSRDDKEQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
KADPDNAAFYKDNAAKYIAKLDALDKEAKQKYADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQI
VGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMRYNLDKIHDGLAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 1e-77 54
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 7e-78 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_0709 YP_002349678.1 manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein) VFG2157 Protein 1e-131 96
LMHCC_0709 YP_002349678.1 manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein) VFG2165 Protein 2e-81 60
LMHCC_0709 YP_002349678.1 manganese ABC transporter substrate-binding lipoprotein (Adhesin B) (Saliva-binding protein) VFG1359 Protein 4e-77 53