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Name : LMHCC_0420 (LMHCC_0420) Accession : YP_002349391.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : neopullulanase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 427946 - 429721 bp Length : 1776 bp Strand : + Note : - DNA sequence : ATGGAAAAAGCAGGGATTTATCATCAACCAGCGAGTAGCTATGCTTATAGTTATGACGCTAAAACACTACATATTCGGAT TAGAACGAAACGCTTGGATATTAGCGAGGTTACTCTAATTGCTGCCGACCCTTACTTATGGAAAGACGGAAAATGGCAAA GTGAATCTTATACAATGCGCAAAATCGCAGAAACAGAAGAGCACGATTATTGGTTTTTTGCAATTACACCAGAACATAGA CGCCTTCAATATGGATTTTTATTAACGGATACAAAAGGGGAAAAGACCTTTTACGGCGGACGTGGTTTTTTTGAACCAAC AGAAGCGAATTTAGATACAATGGATTATTACTTTAAATTTCCATTTATCCATGCGGTGGATACTTTTGAGGCGCCTGAAT GGGTTGGTAAAACAATTTGGTACCAAATTTTCCCAGAACGTTTTGCAAATGGGAATCCAGCTATTTCTCCAGAAAATGCC TTGCCGTGGGGAAGTAAAGATCCGAACACAACAGACTTTTTCGGCGGTGATATAGAAGGAATTATCGAGCATTTAGATTA TTTAGCAGAGCTTGGTATTAATGGGGTTTACTTGACACCTGTGTTTGAAGCACCAACCAATCATAAATACGATACGGTTG ATTATAAAAAAATTGATCCGCATTTTGGGGATAAAGAAACGTTTAGAAAATTAGTTCAGGAAGCGCATAAACGCGGGATT CGTATCATGTTAGATGCGGTGTTCAATCACATTGGCGATACTTCAGCAGAATGGCAAGACGTTGTTTTAAATGAAGAAAA ATCTGCATATCGTGATTGGTTCCACATCCATAGTTTCCCTGTTCGTCAAAATGAAAATGGCAATATCGAAGGAGAACCAA CACTTTCTTACGATACATTTGCTTTCACGACGCATATGCCAAAATTAAATACGGCTAACCCAGAAGTTCAGAAGTATCTA CTGGATATTGCAACTTACTGGATTCGCGAATTTGACATTGATGGTTGGCGCTTAGACGTTGCCAATGAAGTTGATCATGC TTTTTGGAAAGAGTTCAAAAAAGCGGTCCAAGCGGAAAAAGAAGATATTTATATTCTTGGTGAAATTTGGCATGATTCGT GGATTTGGTTGCTTGGAGATGAATTCCATGCCGTAATGAACTATCCATTTACACAAACGATTATTGAGAACTTTATTGAA GAAAAAATTACTCCAGAGCAAATGGTTTCTGGTATTAATGAACAATATATGCGCTATCCAAATCAAGTGAATGAAGTAAT GTTTAATATGCTTGATAGCCATGATACGGCGCGTATTTTAACACGTGCTAATAATGATGAGGATAAAGTGAAACAAGCGC TTGCCTTCATGTTCGCGCACACTGGTTCGCCGTGTATTTATTACGGTACTGAAATCGGCATGGACGGCGGAAATGACCCA GGTTGTCGCAAATGTATGGAATGGGATGAAACGAAACAAAATCAAGATATGCTAGCGTTTACGAAACAATTAATTGCGCT AAGAAAAGATAACCAAGCAATTATCACATCCGGCGAATTAACTTGGCTAGGTGCAAGTAGCGAAACAGGCATTACAGCAT TTTCTAAAGAATTAAATGGTGAAAAACTGCATTTCCTTTTCAATCAAGCAAAAGAAGATAAAGATTTCACAATTTCATTT GAAAATACAGCGACAGATATTTGGAACAACCGAGCTGTAACAGAAAATCTTGTTGTCCCAGCAAAAGGATTTCTTGTTAT TAAAGAAAACAGCTAA Protein sequence : MEKAGIYHQPASSYAYSYDAKTLHIRIRTKRLDISEVTLIAADPYLWKDGKWQSESYTMRKIAETEEHDYWFFAITPEHR RLQYGFLLTDTKGEKTFYGGRGFFEPTEANLDTMDYYFKFPFIHAVDTFEAPEWVGKTIWYQIFPERFANGNPAISPENA LPWGSKDPNTTDFFGGDIEGIIEHLDYLAELGINGVYLTPVFEAPTNHKYDTVDYKKIDPHFGDKETFRKLVQEAHKRGI RIMLDAVFNHIGDTSAEWQDVVLNEEKSAYRDWFHIHSFPVRQNENGNIEGEPTLSYDTFAFTTHMPKLNTANPEVQKYL LDIATYWIREFDIDGWRLDVANEVDHAFWKEFKKAVQAEKEDIYILGEIWHDSWIWLLGDEFHAVMNYPFTQTIIENFIE EKITPEQMVSGINEQYMRYPNQVNEVMFNMLDSHDTARILTRANNDEDKVKQALAFMFAHTGSPCIYYGTEIGMDGGNDP GCRKCMEWDETKQNQDMLAFTKQLIALRKDNQAIITSGELTWLGASSETGITAFSKELNGEKLHFLFNQAKEDKDFTISF ENTATDIWNNRAVTENLVVPAKGFLVIKENS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 1e-144 | 50 |
