Gene Information

Name : LMHCC_2970 (LMHCC_2970)
Accession : YP_002351915.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2938620 - 2939099 bp
Length : 480 bp
Strand : +
Note : single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein)

DNA sequence : 
ATGATGAATCGTGTAGTACTTGTAGGACGACTAACGAAAGACCCGGATTTAAGATACACACCAGCAGGCGTAGCTGTTGC
GACTTTTACGCTAGCAGTAAATCGCCCATTTAAAAATGCACAAGGAGAACAAGAAGCAGATTTCATTAATTGTGTTGTTT
GGCGTAAACCAGCAGAAAACGTTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGAATTCAAACCCGT
AATTACGAGGATAGCGACGGTAAACGAGTTTTCGTTACAGAAGTAGTTGCTGAGTCAGTTCAATTCTTAGAGCCTAGAAA
CCACGCAGAGGGCGATACATCGAATAATTACCAAAATCAAGCTAATTATTCAAACAACAATCAAACAAGCTCATATCGAG
CGGATACGAGCCAGAAGAGCGATTCATTTGCAAACGAAGGTAAGCCGATTGATATTAATCCGGATGATTTACCTTTCTAA

Protein sequence : 
MMNRVVLVGRLTKDPDLRYTPAGVAVATFTLAVNRPFKNAQGEQEADFINCVVWRKPAENVANFLKKGSMAGVDGRIQTR
NYEDSDGKRVFVTEVVAESVQFLEPRNHAEGDTSNNYQNQANYSNNNQTSSYRADTSQKSDSFANEGKPIDINPDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-33 65
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-38 56
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-37 56
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 5e-38 56
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 5e-38 56
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 5e-38 56
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-38 56
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 6e-35 52
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 9e-35 52
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 1e-22 48