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Name : LMHCC_2858 (LMHCC_2858) Accession : YP_002351803.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Resistance Product : KDP operon transcriptional regulatory protein KdpE Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2858079 - 2858774 bp Length : 696 bp Strand : + Note : - DNA sequence : ATGAACAGCAAACGACTTGTGCTAATTGTGGAAGATGAAGAGGGCATCAGTAATTTTATTTCAGCTGTTTTGACTGCAAG TGATTACTCGGTGATTAAAGCAGTGAATGGAAAAGAAGCGCTAGAGCAGACAGCGAGCCATTCACCAGATGTTGTGCTAC TTGATCTAGGTTTGCCCGATGTAGAAGGACTGGATGTGCTCCGTGATATTCGCGTTTGGTCAAAAGTACCGATTATTGTT GTATCCGCGCGCGATCATGAACGAGAGAAAGTGACGGCACTTGACCATGGCGCAGATGATTATATTACGAAACCATTCGG CACATCGGAACTACTGGCGCGGATTCGGACTGCCCTAAGGCACATTCAACCAAGTAGCAAAGAAACGCCAAATGACCATA TTATTCGCATTCAAGACCTTTTTATTGATGACGACCGCCGACTTGTCAAAATGGGCGATACGGAAATTCATTTTACGCCA ATTGAATATAAAATTTTGCTTCTATTAGCTCGCCACGCCGGAAAAGTCCTTACGCATGATTTTATTATTCGCGAAATTTG GGGACCTTATCCTAGTGAAAATCAAGCGCTTCGGGTCAATATGAGTAATATCCGACGTAAAATTGAAAAAAATCCAGCAG AACCTGCATACATTTTGACAGAAGTTGGAGTTGGGTACCGGATGGCAGAAGAATAA Protein sequence : MNSKRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSPDVVLLDLGLPDVEGLDVLRDIRVWSKVPIIV VSARDHEREKVTALDHGADDYITKPFGTSELLARIRTALRHIQPSSKETPNDHIIRIQDLFIDDDRRLVKMGDTEIHFTP IEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEKNPAEPAYILTEVGVGYRMAEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 2e-41 | 50 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 2e-41 | 50 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 1e-23 | 42 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 2e-23 | 41 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 3e-23 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 3e-23 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 3e-23 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 3e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LMHCC_2858 | YP_002351803.1 | KDP operon transcriptional regulatory protein KdpE | NC_012469.1.7685629. | Protein | 7e-29 | 42 |
