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Name : LMHCC_2857 (LMHCC_2857) Accession : YP_002351802.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : sensor protein KdpD Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2205 EC number : - Position : 2855392 - 2858082 bp Length : 2691 bp Strand : + Note : - DNA sequence : ATGGAAACGAATCGTCCAAGTCCGGATGCGCTACTGGTGAATTTGCAAGAAGAAACAGATTCATCCGTGGGTAAATTAAA AATATATTTTGGCTTTGCGGCAGGTGTTGGGAAAACATATGCCATGTTAAGTGACGCCAAAGATCAATTAGCAGCAGGTG TGGATGTCGTGGCGGGTTATATTGAACCTCATGCTCGCGAGGAAACGCTGAGAATGTTAGAAGGAATCCCGATTATTCCA CCAAAAGCAATTACTCACAAAAATATTGCGCTCAAAGAATTCGATTTGGACGAAGCGTTGAAACGGAAACCAGAACTGAT TTTGGTAGACGAACTCGCGCATACGAATGCAGCAGGCGTGCGAAACAAGAAGCGTTTCCAAGATGTGGAAGAATTACTCC AAGCAGGAATCGATGTATACACAACTGTTAATGTGCAGCATATTGAAAGCTTGAATGATATCGTTGAAGGTATTACCAAG GTCGCCGTGCGCGAAACGATTCCCGATTATGTTTTTGATGAAGCAGACCGAGTAAAACTAATTGATATTGAACCCGACGA ACTTTTAAAACGACTCGAACAAGGAAAAATTTATCAACCAGAACGTGCGCGAACAGCTATGCAGAACTTCTTCACTAGAG AAAACTTAAAACTCTTGCGCGAAATTGCGATGCGGAAAGCGGCTGACCGAATTAGCCACGAATATGATCAAACGGGTATT TATCCAGAAAAACGTGCGAGTAGTAAATGGCTTGTTTGTATTGGGACATCGCCTTCGTCTGCAAAACTCATTCGCTGGAC AGCGCGCACCGCCGAGGCTTTCCGCGCACCATGGACTGCTCTTTATATTGAAAATGAAGAAAATGATTATATGACCAAAG CAGAGAAAAAATGTTTGCGGGAAACGATGGAACTTGCTGAACGACTCGGTGCAGAGATTGTTACCCTCGCTGGACATGAT ATTGCGGAAACAGTAGCGGAGTATGCTCGTTTGACCGGTGTGACAAATATCGTTGTTGGGAAATCGCGCCGACGCATGGG CTTGCGGTCCTTATTTGAAGAGGATTTTGAAGACCGGCTTATCACGCATTTGGATAACGTTGATATGCACATCATCCCTT CAAGCCAACCGAAAACAAAAAAACGGCGAATGAAAATGCGTTTTAAAAGTTTCCTCACATGGCACGATATGGCGAAAATG GTCTTACTATTAACGCTAGCGACAGCGATTTGTGTCGGCTTAAGTGAATTTGGCATTGGCGATCAAAATGTGATTATGGT GTATATTTTGTCCGTTTTAATTATTTCTCGCGTAACGAGCGGTTATGTGTATGGTGTTCTAGGTTCCATCATTGGCGTTA TGTTATTTAATTTTTTCTTCACGTCGCCGCTTTATACATTTAACACGATTCAGGCAGGATATCCGGTGACTTTTGGAATT ATGCTTTTGGTGGCGTTGATTACGAGTGCGCTAACGGTTCGAATTAAAACACAAGCGAGCCTTGCTGTCGAGCGGGAACG CCGAACCGAAGTACTCTATGAAATCAATAAACAACTTTTGGTGACGCGCAATTTAAAAGGAATTATTAATCTTACAAATG AATATATTTTACATTTATTTAGCCGTTCCGTTATTTTTTATTCTGCTGACCCTGCCAAAAGTAATGAAGGGATTTTTGTA CAAGCAGAAGGAAAAGAAGATGCGAGCGCGCTGCTTAATGCAGATGAAGAAGCGGTTGCACACTGGGTATTTAAAAATAA AAAACGAGCAGGCGCTGGGACAGATACGCTAATGGGGGCTTTTGGTTATTATATGCCGGTGATGTCACAAGGAAAAGTAC TTGGTGTCATCGGGGTTTCTTGTTCCCCTGAAGAAGGACCGCTCACACAAGATAACCGGATATTTTTACGAATGATTAGT TCTCAAGTCGCGCTGGCTTTAGAGCGCCAGTATCTATCAGAAGAACAGCGCCAAATCGTTATTGAATCAGCCAAAGAAAA GATGAGAAGTAATCTGCTACGGGCTATTTCACACGATTTGCGAACGCCACTTACAGGAATCATTGGCGCGAGTTCCGCCT TACTTGAAAAAGAAGATGAATTAGACAAAGAAACCGAGCGAAACTTAATTAGAGGTATTAAAGATGATTCAGGCTGGCTC ATTCGGATGGTCGAGAATTTGCTATCTGTGACACGAATTAGTGAAGGTTTGGTAAGTTTGGAACGAGCACCGGAAGCCGT TGAAGAAATTGTTGGTGAAGCGGTTGGACGCATAAAAAAACGTTTCAGAGACCGAATCATTCACGTAAAAGTTCCGCGCG ATCTTTTGATGGTTCCGATGGATGGGACGTTGATTGAACAAGTGCTTATTAATTTAATGGAAAATGCCTTGCGTCACGGT GGAACAAGTGCAGAAGTTTGGGTAGACGTGACGAAAACGAAGCAAAGTGCGATTTTCAGTGTACGTGATAATGGAAAAGG GATTCCGGAAAATCGTTTGCCAGATTTATTTGATACTTTTGCGGTAGAGGCAAGAGAACGTTCAGACATGTCCCGTGGCT TGGGGCTGGGCTTATCAATTTGTATGTCGATTATTCGGGCGCACGACGGAACGCTAGAAGCGAAAAACAACAAACATGGC GGGGCGACATTCTGGTTCACTTTGCCACTAGATGGAGGAGATGGAAAATGA Protein sequence : METNRPSPDALLVNLQEETDSSVGKLKIYFGFAAGVGKTYAMLSDAKDQLAAGVDVVAGYIEPHAREETLRMLEGIPIIP PKAITHKNIALKEFDLDEALKRKPELILVDELAHTNAAGVRNKKRFQDVEELLQAGIDVYTTVNVQHIESLNDIVEGITK VAVRETIPDYVFDEADRVKLIDIEPDELLKRLEQGKIYQPERARTAMQNFFTRENLKLLREIAMRKAADRISHEYDQTGI YPEKRASSKWLVCIGTSPSSAKLIRWTARTAEAFRAPWTALYIENEENDYMTKAEKKCLRETMELAERLGAEIVTLAGHD IAETVAEYARLTGVTNIVVGKSRRRMGLRSLFEEDFEDRLITHLDNVDMHIIPSSQPKTKKRRMKMRFKSFLTWHDMAKM VLLLTLATAICVGLSEFGIGDQNVIMVYILSVLIISRVTSGYVYGVLGSIIGVMLFNFFFTSPLYTFNTIQAGYPVTFGI MLLVALITSALTVRIKTQASLAVERERRTEVLYEINKQLLVTRNLKGIINLTNEYILHLFSRSVIFYSADPAKSNEGIFV QAEGKEDASALLNADEEAVAHWVFKNKKRAGAGTDTLMGAFGYYMPVMSQGKVLGVIGVSCSPEEGPLTQDNRIFLRMIS SQVALALERQYLSEEQRQIVIESAKEKMRSNLLRAISHDLRTPLTGIIGASSALLEKEDELDKETERNLIRGIKDDSGWL IRMVENLLSVTRISEGLVSLERAPEAVEEIVGEAVGRIKKRFRDRIIHVKVPRDLLMVPMDGTLIEQVLINLMENALRHG GTSAEVWVDVTKTKQSAIFSVRDNGKGIPENRLPDLFDTFAVEARERSDMSRGLGLGLSICMSIIRAHDGTLEAKNNKHG GATFWFTLPLDGGDGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpD | NP_814336.1 | sensor histidine kinase KdpD | Not tested | Not named | Protein | 3e-145 | 41 |
| ef0090 | AAM75293.1 | EF0090 | Not tested | Not named | Protein | 2e-145 | 41 |
