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Name : kdpB (LMHCC_2855) Accession : YP_002351800.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 2852744 - 2854789 bp Length : 2046 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGATGGAAAAAGGTATTTGGAAAGATGCGCTGATTCAGTCGACGAAAAAACTGTCTCCAAAACTGCAATTGAAAAATCC GGTGATGTTGCTTGTTTATGTTGGTGCGATTTTGGCAACGAGCCTTTATTTTCTCGGTTTCTTCGGGATTTCGGATGAGA AGTCTGGTTATACGCTAGCAATTGCACTGATTTTATGGTTTACAGTGTTATTTGCGAATTTTGCTGAGGCGATTGCGGAA GGTCGCGGTCGAGCACAGGCGGATAGTTTGAAAATGGCTCGAAAAGACGTTTTAGCTCGAAAATTGAAGAATATTGATGA TAAAACGGATGTGATCGAAATTGCTTCGAATGACTTGAAAAAAGGCGACATTGTGTATGTCCTTGCGAATGAACAAATCC CGATGGATGGTGAGGTTATTGAAGGTGCGGCTTCAGTTGATGAAAGTGCAATAACTGGGGAGTCTGCCCCCGTAATTCGA GAGTCTGGCGGGGATAGAAGTGCCGTGACGGGTGGAACTACGCTTGTTTCTGACTGGCTTGTTGTTCGTGTGACGGCGGT CTCTGGAGAAAGTTTCTTAGATAAAATGATTGCAATGGTGGAAGGTGCTTCACGGAAAAAGACACCGAACGAGATTGCTC TACAAATTTTGCTTGTAACGCTTTCGATTATTTTTCTGACGGTTTCAGCGACACTTTTACCATTTACTGAATTTGCGAGT AAGCAGGCGGGTGCTGGATCGGCAATTTCGATTACGAATGTGATTGCTTTGCTTGTTTGTTTGGCGCCAACTACCATTGG TGCACTACTTTCGTCGATTGGAATTGCAGGGATGAGCCGGTTAAATCAAGCGAATGTTTTAGCGATGAGTGGTCGTGCGA TTGAGGCAGCTGGTGATGTGGATGTGCTTTTGCTCGATAAAACTGGGACGATTACACTGGGAAACCGGAAAGCAAGCGAA TTTTTGCCTGTGGATGGTGTGACGGAACAAGAGCTGGCCGATGCGGCGCAACTTTCCTCGATTGCGGACGAAACAGCGGA GGGCAGGAGTATTGTTGTATTAGCGAAAGAACGGTTCGACATTCGCGGTCGAGATTTTGCTGAAATGCACGCAGAATTTG TTCCCTTCACTGCAACGACGCGAATGAGCGGAATTGACTATCAAGAAAATACGATTCGAAAAGGTGCGGCGGATGCGGTT CGCGCTTACGTAACGGCGAATGGCGGGACGTACCCAAAAGAGTGTGATGCGATTGTGAGCAAAGTTGCTGGTGCTGGTGG TACACCGCTTGTAGTAGTCCGAAATAACAAAGTGCTAGGCGTTATTTATTTAAAAGACATCGTGAAAAATGGAGTGAAAG AACGTTTCCTCGATTTACGAAAAATGGGTATTAAAACAATTATGATTACTGGCGATAATCCAATGACTGCAGCAGCCATT GCGGCGGAAGCAGGAGTCGATGATTTTCTAGCAGAAGCAACCCCAGAAGCAAAATTGGAATTAATTCGCGAATATCAACG GGAAGGTCATTTAGTGGCGATGACAGGAGACGGGACAAATGATGCGCCAGCTCTTGCACAAGCGGATGTAGCTGTTGCGA TGAATACAGGAACACAAGCTGCAAAAGAAGCTGGGAATATGGTTGATCTGGATTCTAGTCCTACTAAATTAATTGATATT GTTCGGATTGGCAAACAACTTTTAATGACGCGCGGTGCACTGACAACATTTAGTGTCGCTAATGATTTAGCGAAATACTT TGCGATTATTCCAGTGCTATTTTACGGTATTTTCCCACAGCTTGAAGCACTTAATTTAATGGGATTAACCAGCCCGACGA GCGCTATTTTATCAGCGATTATTTACAATGCGGTGATTATCATTATTCTAATTCCGCTTTCTTTAAAAGGTGTGAAGTAT CGTGAAATGCCGGCCGGGAAATTACTGAGCAGAAATATGTTGATTTATGGTCTGGGCGGTTTGATTGCTCCATTTATCGC GATTAAATTGATTGATATGCTGTTAACTGTTTTAGGAATCGTTTAA Protein sequence : MMEKGIWKDALIQSTKKLSPKLQLKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKMARKDVLARKLKNIDDKTDVIEIASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLTVSATLLPFTEFAS KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAV RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNAVIIIILIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 73 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 73 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-142 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-142 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 8e-143 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 9e-143 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-142 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-142 | 56 |
