|
Name : kdpA (LMHCC_2854) Accession : YP_002351799.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : - Position : 2851047 - 2852732 bp Length : 1686 bp Strand : + Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGAAGTATATCGTGATGCAAGATGTGTTTTTTGTTGTATTGTTATTAGTTTTGGCGGTGCCTCTTGGAATTTATATGTA CAAAGTGATGATTGGGGAAAAGGTATTTTTGTCACGAGTGTTAGAGCCAGTTGAACGGTTTGGTTATCGGTTGATGGGTG TGAGTGAGGTTGGAATGTCCGCGAAACGTTATGCGGTATCCGTACTTGCTTTTAGTGCAGTTGGCTTTGTATTTGTAATG GCGGTGTTGATGCTACAAGGCTTTTTACCGCTCAACCCGGAAGGTATGAAAGGACTTAGTTTTAGTCTGGCGTTTAATAC GGCGGCGAGTTTTGTGTCGAATACGAACTGGCAAGCTTATTCTGGTGAGACGGCTTTATCTTATTTTTCGCAGTCGATTG GCTTAACGGTGCAGAACTTTGTTTCGGCGGCGACAGGGATTGCAGTTTTATTTGCGGTAATTCGCGGCTTTATATGGAAG AAACAGAAAACAGTGGGAAATTTTTGGCAAGATTTATTTCGAGTGACGCTTTATATTTTACTACCACTTTCGCTTGTTTT GGCGCTTCTTTTAGTTTCACAAGGAGTGGTGCAGTCCTTTGCTGATTATTCGGTTGTTGAAACACTTGAAAATGGGGCAA AGCAGTTGATTCCGTTAGGCCCAGCAGCGAGCCAAATTGCTATTAAACAGCTTGGTACAAATGGTGGTGGCTTTTTCGGA GCGAACTCTGCGTTTCCGTTTGAAAATCCCTCTAGTTTTACTAATTTAATAGAAATGTTGGCGATTTTACTTATTCCAGT GGCGCTTGTTGTGATGTTTGGGCGTGCGGTGAAGGATAGTAAGCAAGGACGCGCGATTATGACAGCGATGATGATTGTTT TTGTTATTGGTGTTGTTGCGATAACTATCTCCGAACAATTTGCAGGTCCACATTATCAAGGTGTTGCGACTTCTGGCAGT ATGGAAGGAAAAGAGGTTCGATTTGGTGTTGGCGGTTCGTCGCTTTTTGCAGCTTCCACGACGGCAGCCTCGAATGGAGC GGTGAACGCAATGCACGACAGTTTGACTCCGCTTGGGGGACTGGTGCCGATGTTCTTTATGCAACTTGGTGAGGTTATTT TTGGCGGTGTTGGTAGCGGGCTTTATGGCATGATTGGCTTTATTATTTTGACGGTGTTTATTGCGGGGCTCTTGGTTGGG CGGACACCGGAATACTTAGGGAAGAAAATTGAACCTTATGATATGAAAATGGTTTGTTTGCTTATTTTGGTTCCGCCACT TTTGACTTTATTCGGTACGGCGGTTGCGGTGATGATGCCAAGTGTGCAAGCTTCTGTTTCGGCGAGTGGGGCGCACGGTT TTTCTGAGGTGCTCTATGCATTTACTTCGATGGGAAATAATAATGGTAGTGCTTTTGCTGGATTTGCGGCGGACACGACG TTTACAAATATGGTTGGCGCAGTAATGATGTTACTTGCTCGTTTTATTCCACTTGTTGCGGCGCTTTATTTAGCGCAAAA TATGGCTGGAAAGAGTTCGGTTGCAGCGAGCAGCGGGACGTTATCGACGAAAAATGGCATGTTTATTGGTCTTTTAATTG GTGTTGTGGTACTTGTTGGCGCGCTTAGTTTCTTGCCAGCACTTGCGCTTGGACCGATTGCGGACTTCTTTACAACTTTC AAATGA Protein sequence : MKYIVMQDVFFVVLLLVLAVPLGIYMYKVMIGEKVFLSRVLEPVERFGYRLMGVSEVGMSAKRYAVSVLAFSAVGFVFVM AVLMLQGFLPLNPEGMKGLSFSLAFNTAASFVSNTNWQAYSGETALSYFSQSIGLTVQNFVSAATGIAVLFAVIRGFIWK KQKTVGNFWQDLFRVTLYILLPLSLVLALLLVSQGVVQSFADYSVVETLENGAKQLIPLGPAASQIAIKQLGTNGGGFFG ANSAFPFENPSSFTNLIEMLAILLIPVALVVMFGRAVKDSKQGRAIMTAMMIVFVIGVVAITISEQFAGPHYQGVATSGS MEGKEVRFGVGGSSLFAASTTAASNGAVNAMHDSLTPLGGLVPMFFMQLGEVIFGGVGSGLYGMIGFIILTVFIAGLLVG RTPEYLGKKIEPYDMKMVCLLILVPPLLTLFGTAVAVMMPSVQASVSASGAHGFSEVLYAFTSMGNNNGSAFAGFAADTT FTNMVGAVMMLLARFIPLVAALYLAQNMAGKSSVAASSGTLSTKNGMFIGLLIGVVVLVGALSFLPALALGPIADFFTTF K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 4e-87 | 58 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 3e-87 | 58 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-49 | 45 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 2e-50 | 45 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 2e-49 | 45 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-49 | 45 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-49 | 45 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-49 | 45 |
