|
Name : dnaB (LMHCC_2616) Accession : YP_002351565.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2603284 - 2604636 bp Length : 1353 bp Strand : - Note : unwinds double stranded DNA DNA sequence : GTGGATAATAATTTCCAGGACAGAACACCACCACAAAATATTGAAGCCGAACAAGCTGTACTGGGCGCGATATTTCTTGA GCCGAATGCGCTGATTACCGCTTCTGAAATTTTAATGCCGGATGATTTTTATCGTACTGGTCACCAAATCATTTTTGAAA CGATGCTTGATTTGAATGACCACGGGAAAGCTGTCGATGTATTAACGGTTTATGAGGCGCTTGCTGCCAAAGGTAATTTG GAGGATGCAGGTGGTTTGCCTTATTTGACGGAACTATCCGGTGCTGTACCAACTGCGGCTAACTTGGAATACTATGCCCA TATTATCGAGGACAAGGCGCTTCTGAGACGTTTAATTAGAACTGCTACCCAAATTGCGACAGATGGTTATTCGCGCGAGG ACGAGCTCGACATGCTTATGGACGAGGCGGAAAAGAGTATCTTGGAAGTTTCACAACGCAAAAATGTCGGAGCGTTCAAG AATATTAAAGATGTCCTTGTTAAAACATATGATGATATTGAAATTTTGCATAATCGCAAAGGTGATATTACTGGGATTCC AACTGGATTTAACGAGCTGGACAAAATGACAGCTGGATTTCAGCGGAATGATTTAATTATTGTTGCCGCGCGTCCTTCCG TTGGTAAAACAGCATTCGCCCTAAATATTGCGCAAAATGTTGCAACGAAAACTGATGAGAATGTGGCCATTTTTAGTTTG GAAATGGGTGCGGAACAACTTGTTATGCGTATGCTTTGTGCGGAAGGAAATATTAATGCGCAGAATTTACGGACGGGTGC TTTAACGAGTGATGATTGGCAAAAGCTGACAATTGCTATGGGTACACTTTCTAATTCTGGGATTTATATTGATGATACGC CGGGTGTGCGGGTGAATGAGATTCGTTCCAAATGCCGTCGTTTAAAACAAGAAACTGGTCTTGGTATGATCGTAATCGAC TACTTGCAGCTTATTGCGGGGAGCGGTCGTGGTGGCGAAAATAGACAACAAGAAGTTTCTGAAATTTCTCGGTCGTTAAA AGCTTTGGCGCGGGAACTTGAAGTGCCGGTTATTGCACTTTCGCAGTTATCTCGTAGTGTAGAGCAACGCCAAGATAAAC GCCCAATGATGTCAGATATTCGTGAATCTGGTTCGATTGAGCAAGATGCCGATATCGTAGCCTTTTTATACCGAGAAGAT TACTATGACCGGGAAGGCGAAAATGATGGCACGATTGAGATTATTATTGCGAAACAACGTAATGGTCCAGTTGGTGATGT GAAACTAGCCTTTGTAAAAGAATACAATAAGTTTGTGAATTTAGAAGTGCGGTACGACGACGCAATGGCTTAA Protein sequence : MDNNFQDRTPPQNIEAEQAVLGAIFLEPNALITASEILMPDDFYRTGHQIIFETMLDLNDHGKAVDVLTVYEALAAKGNL EDAGGLPYLTELSGAVPTAANLEYYAHIIEDKALLRRLIRTATQIATDGYSREDELDMLMDEAEKSILEVSQRKNVGAFK NIKDVLVKTYDDIEILHNRKGDITGIPTGFNELDKMTAGFQRNDLIIVAARPSVGKTAFALNIAQNVATKTDENVAIFSL EMGAEQLVMRMLCAEGNINAQNLRTGALTSDDWQKLTIAMGTLSNSGIYIDDTPGVRVNEIRSKCRRLKQETGLGMIVID YLQLIAGSGRGGENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRED YYDREGENDGTIEIIIAKQRNGPVGDVKLAFVKEYNKFVNLEVRYDDAMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-71 | 42 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-80 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-72 | 41 |
