Gene Information

Name : LMHCC_2442 (LMHCC_2442)
Accession : YP_002351391.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Virulence
Product : 1-phosphatidylinositol phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2429241 - 2430194 bp
Length : 954 bp
Strand : +
Note : 1-phosphatidylinositol phosphodiesterase (Phosphatidylinositol diacylglycerol-lyase) (Phosphatidylinositol-specific phospholipase C) (PI-PLC)

DNA sequence : 
TTGTATAAGAATTATTTGCAACGCACATTAGTTTTATTGCTCTGTTTTGTTTTATACTTTTTTACTTTCCCATTAGGCGG
AAAAGCATATTCGCTTAATAACTGGAATAAGCCAATAAAGAACTCTGTAACTACAAAACAATGGATGTCCGCTCTACCTG
ACACAACGAGCCTAGCAGCCATTTCTATCCCAGGTACACATGATACGATGAGTTACAACGGAGACATAACATGGACATTA
ACCAAACCACTAGCTCAAACACAAACGATGTCATTGTACCAACAACTAGAAGCAGGAATACGGTACATCGATATTAGGGC
AAAAGACAATCTCAATATTTACCATGGGCCAATTTTTTTAAATGCATCACTTTCAGGTGTATTAGAAACGATTACTCAAT
TTTTAAAGAAAAATCCAAAAGAAACCATTATTATGCGTTTAAAAGACGAACAGAACAGCAATGATAGTTTTGATTACCGA
ATTCAACCATTAATCAACATTTACAAAGATTATTTTTACACCACTCCCAGAAATGACACGAGCAATAAAATCCCTACATT
GAAAGATATCCGCGGAAAAATATTATTACTTTCAGAGAACCACACAAAAAAGCCATTAGTCATTAATTCACACAAATTCG
GCATGCAGTTCGGCGCATCCAACCAAGTAATTCAAGATGACTACAATGGTCCGAGTGTGAAAAAAAAATTCAAAGAGATT
GTCCAGACTGCTTATCAAGCTTCTAAAGCGGACAACAAACTGTTTCTTAACCATATTAGTGCCACTTCATTAACATTCAC
ACCTCGTCAGTATGCTGCAGCATTAAACAACAAAGTAGAGCAGTTCGTACTCAACTTAACATCGGAAAAAGTTCGAGGAT
TAGGCATACTAATCATGGACTTCCCCGAAAAACAAACAATTAAAAACATCATAAAAAACAATAAATTCAACTAA

Protein sequence : 
MYKNYLQRTLVLLLCFVLYFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTSLAAISIPGTHDTMSYNGDITWTL
TKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLNIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR
IQPLINIYKDYFYTTPRNDTSNKIPTLKDIRGKILLLSENHTKKPLVINSHKFGMQFGASNQVIQDDYNGPSVKKKFKEI
VQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
plc AAA69526.1 phosphotidyl inositol-specific phospholipase C Virulence LIPI-1 Protein 1e-129 98
plcA CAA51230.1 1-phosphatidylinositol phosphodiesterase Virulence LIPI-1 Protein 2e-94 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_2442 YP_002351391.1 1-phosphatidylinositol phosphodiesterase VFG0073 Protein 8e-129 98