Gene Information

Name : LMHCC_0227 (LMHCC_0227)
Accession : YP_002349202.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Resistance
Product : hemin import ATP-binding protein HrtA
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 222885 - 223565 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAACTCTACTATCTTTTGATAAAGTGTATAAAGATTACCCGTCCGGTCCTTCAATTATTCATGCACTGAAGGAAAC
AAACTTTGAAGCTAAAAAAGGCGAACTAATCGCGATTGTTGGTCCGAGTGGTTCTGGTAAAAGTACACTGCTTTCTCTTG
CCGGAGCGCTATTAACACCGACTGGCGGAACGATTTCTATTAACGGCAAATCAGTCGGGAATCTATCTTCCAAAGAACAA
ACAGCTCTCCGCTTAGAAGAAATTGGCTTTATTTTCCAAGCAGCTCACTTAGTTCCTTATTTACATGTAAAAGATCAAAT
CAGCTTTATTGGAAAAATGGCTGGAAAAAGTGCGGCGGAGCTTGAAAAAGATACAGCTTCACTTCTAAGCCAACTTGGCA
TTAGCGATCGCGCAAATTTCTATCCAAAAGATTTATCTGGCGGTCAAAAGCAACGTGTCGCTATTGCTCGTGCGCTTATT
AATCAACCTTCCGTTATTTTAGCCGATGAACCAACTGCGAGTCTTGATACAGAAAGAAGTCGTGAAGTTGTCGAGCTTAT
CCGGAATGAAGTTGTGCAAACGAGCCGAACAGCAATCATGGTAACACATGACGAACGTATGCTAGATTTAGTCAACCATG
TATATCGTATGGAAGACGGAATACTTACCCAAGAAAGCTAA

Protein sequence : 
METLLSFDKVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSGSGKSTLLSLAGALLTPTGGTISINGKSVGNLSSKEQ
TALRLEEIGFIFQAAHLVPYLHVKDQISFIGKMAGKSAAELEKDTASLLSQLGISDRANFYPKDLSGGQKQRVAIARALI
NQPSVILADEPTASLDTERSREVVELIRNEVVQTSRTAIMVTHDERMLDLVNHVYRMEDGILTQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-34 48
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_0227 YP_002349202.1 hemin import ATP-binding protein HrtA CP001581.1.gene798.p Protein 4e-28 43
LMHCC_0227 YP_002349202.1 hemin import ATP-binding protein HrtA NC_008702.1.4606598. Protein 6e-26 43