Gene Information

Name : LMHCC_1879 (LMHCC_1879)
Accession : YP_002350834.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1872155 - 1872361 bp
Length : 207 bp
Strand : -
Note : conserved domain protein

DNA sequence :
ATGAAAAATATTAAGATGAAAGTTGCTCGAGTGGAAAAGGATATTTCACAGGAAGAGCTCGCAAAACTTATTCATGTGTC
TAGGCAAACGATTAGTTCAGTGGAAGCGGGAAATTATAATCCCACGCTGAATTTATGTATTGCTATTTGCAAGGCGTTAG
GAAAAACGCTTGATGATTTATTTTGGGAGGAAGATGACAATGTTTAA

Protein sequence :
MKNIKMKVARVEKDISQEELAKLIHVSRQTISSVEAGNYNPTLNLCIAICKALGKTLDDLFWEEDDNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-08 46
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 8e-09 46
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-09 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_1879 YP_002350834.1 hypothetical protein VFG2175 Protein 2e-09 46
LMHCC_1879 YP_002350834.1 hypothetical protein VFG2168 Protein 2e-09 46