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Name : LMHCC_1709 (LMHCC_1709) Accession : YP_002350664.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP+) (ssdh) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1707545 - 1709011 bp Length : 1467 bp Strand : - Note : - DNA sequence : TTGAGTATTAAAGAAACAGCCTTACCAAAAGTTCAAACAAAATTATTTATTAATGGAAAATGGACGGATGGAGATAATAA AGAAACAAAAGATATTGTAAACCCAGCAAACGGAGAAGTTATTGCCAAAATCGCTCAAGCTGGACCAAACGAAACCAAAA AAGCCATTAAAGCTGCAAAAGAAGCATTTCCTGATTGGGCAAAAATGGAACTAGCTGATCGCGTCAAATTATTACACAAA ATTGCCGATTTAATGGAAGAAAAAGCAGATACACTAGCAAAAATTATGACGCTTGAACAAGGTAAACCGCTAAAAGAATC AAAAGGAGAAGTCCTAACTGGCGCAGAAAACTTCCGATTCGCTGCAGAAGAAGCAAGAAGATTATATGGGGAAACTATCC CAGCGCCAAACAATCATGCGTTTATCGTGAAAAAACAACCAATTGGCGTAGTTGCGGCCATTACTCCGTGGAATTTCCCA GGTGGTATGGTGACACGAAAACTTGCTCCAGCGCTTGCAACCGGAAATACAATCGTATTAAAACCATCCGGAGATACGCC GCTTTCAGCCCTAGCTATCTTTGAAATTTTTGAAGAAGCCGGCTTGCCAAAAGGTGTTGCCAATATCGTTATGGGTAGCT CCAAAGAAATCGGCGAAACGTTAACTGACAGTGATGATGTTCGTAAACTAACTTTCACCGGCTCCACGAAAGTCGGTCAA ACACTATTCAAACAATCAGCCGAAACACTGAAAAAAATCTCGCTCGAACTTGGTGGACATGCGCCATTTATCGTATTTGA TGATGCGAACCTGGATGCTGCTGTAAATGATTTAGTTGCAGCGAAATTCCGCAATAACGGTCAAGTATGTGTATCGCCAA ACCGAATTTTTGTTGCCAAAGAAATTAAAGAAAAATTCACTAAGGCGCTAGTTGCTAAAGTAAAACAACTAAAAGTAGGT AACGGTTTAGATGATGTGAATGTTGGTCCACTTATCCGCGAAGATGCGATTGACAAAATCGACAAACAACTTAAAAATGC CACAGATAAAGGTGCCAAAGTCTTAACTGGTGGCGGCCGTTTAACAGGTTCCGACTATGACAAAGGGAACTTCTACAAAC CAACTGTCTTAGATAATGTTACCCGTGAAATGGATATTTTCTACGAAGAAACATTTGGTCCAGTAATCCCACTCATCACA TTTGAAACGGAAGACGAAGCAATCGAAATGGCGAATGACAGTGAATTCGGTCTTGCTTCTTACTTCTATACAAAAGACTT AGCTCGCGTAGAAAAAGTAGGTGCGGCATTAGAATATGGTATGGTAGGTGCAAACGAAATTGCGATTTCTAACCCAGAAA CCCCATTTGGCGGTGTTAAACATTCTGGTTTCGGTCGCGAAAACGGCCACTACGGTATGGAAGAATACATCCAAGTGAAA TTTATTAATTTAAAATATCGTGACTAA Protein sequence : MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKIAQAGPNETKKAIKAAKEAFPDWAKMELADRVKLLHK IADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVKQLKVG NGLDDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTREMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-96 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-72 | 41 |
