Gene Information

Name : LMHCC_1679 (LMHCC_1679)
Accession : YP_002350635.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Resistance
Product : General stress protein 20U (GSP20U) (DPS protein-like protein)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0783
EC number : -
Position : 1677286 - 1677756 bp
Length : 471 bp
Strand : -
Note : General stress protein 20U (GSP20U) (DPS protein homolog)

DNA sequence : 
ATGAAAACAATCAACTCAGTAGACACAAAGGAATTTTTGAATCACCAAGTAGCGAACCTAAACGTATTCACAGTAAAAAT
TCATCAAATTCATTGGTATATGAGAGGCCACAACTTCTTCACTTTACATGAAAAAATGGATGATTTATATAGCGAATTCG
GCGAACAAATGGACGAAGTAGCAGAACGTTTACTAGCAATCGGCGGAAACCCATTCTCGACTTTAAAAGAGTTTTTAGAA
AATGCGAGCGTTGAAGAAGCTCCTTATACGAAACCAAAAACAATGGATCAATTAATGGAAGACTTAGTTGGTACATTAGA
ATTACTTAGAGACGAATATCAACAAGGTATTGAGCTTACTGACAAAGAAGGCGACAACGTAACAAACGATATGTTAATTG
CTTTCAAGGCAAGCATTGACAAACATATCTGGATGTTCAAAGCATTCTTAGGAAAAGCTCCATTAGAATAA

Protein sequence : 
MKTINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGNPFSTLKEFLE
NASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYQQGIELTDKEGDNVTNDMLIAFKASIDKHIWMFKAFLGKAPLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 2e-31 46
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 2e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_1679 YP_002350635.1 General stress protein 20U (GSP20U) (DPS protein-like protein) BAC0134 Protein 5e-26 46