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Name : LMHCC_1625 (LMHCC_1625) Accession : YP_002350581.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1627768 - 1629942 bp Length : 2175 bp Strand : + Note : - DNA sequence : ATGAACTGTGAAAAATGTAATCAAAATCCAGCAACAATCCAACTATATATGAATATTAATGGCAAGCGTGTAGAAATGCC GCTTTGTGCCTCTTGTTATGCAGAAGTTAGAAATCAAGCCAACTTTGGCGCAAATGAGTTTCCGGGAGCAAGCGGTTCTC CGTTTGACGATATTTTCCGTCAATTGAGTGGTGCTGCTAGTCAAGCAAACCGTGAACAAAGAAGCCAAGCAAACGCACAA GTACAAACACAAACTGCTGGTGGCGGCAATGGTTTACTAGATGAATTTGGAACAAACTTAACAGATATGGCGAAAAATGA GCAACTCGACCCTGTCATCGGTCGTGACAAAGAAATTAAACGCGTCATTGAAATATTAAACCGCCGTAATAAAAATAATC CAGTCTTAATTGGTGAACCAGGTGTTGGTAAAACAGCTGTCGTCGAAGGACTTGCAAATGCGATTGTCGCAGGAGAAGTT CCAAGCAAATTAATGAACAAAGAAGTTATCTTATTAGATGTCGCTTCACTTGTTTCTGGAACAGGGATCCGTGGTCAATT TGAAGAACGCATGAAACAACTAATTAAAGAGCTACAAGAACGTAAAAACACGATTCTATTTATTGATGAAGTGCATACGA TTGTTGGGGCAGGTTCCGCAGAAGGCTCGATGGATGCAGGAAACATTCTAAAACCAGCTCTAGCTCGTGGCGATTTACAA ATGATTGGCGCTACTACGCTAAAAGAGTACCGCACAATCGAAAAAGACGCCGCACTTGAGCGTCGTTTCCAACCAGTAAC TGTAAGCGAACCATCCACAAAAGAAACGCTAACTATTTTAAATGGTTTAAAACCAAAATACGAAGATTTCCATGAAGTAG TTTATTCACCAGAAGCATTATCAGCTGCAGTTGAATTAAGCGCTCGTTACATCCAAGATCGTCATTTGCCAGACAAAGCG ATTGATTTAATGGATGAAGTTGGTTCCAAATACAATCTATCTATTGAAAAATTGGACGAAAATACCGTGAGCGAACGTGT TGCCCGTTTAGAAGAGGAAAAAAATCAAGCTCTTCAAATGGAAGACTACGAAAAGGCAGCTAAAGTTCGTGACGAGATTA CTCGCTTAGAAGAAAATAAAACAAGCAATTCCTTCTCAGAACGCCCAGTCATCCAAGCATCTGATATCCAAGCGATTATT GAAGAAAAAACTGGCATCCCAGTAGGACGTTTACAAGAAGACGAGCAATCCAAAATGAAGAACTTAGAAAGCAACTTAAC TGGTAAAGTTATTGGTCAAGAAGATGCTGTAAGAAAAGTAGCCAAAGCAATTCGTCGTAGTCGTGTTGGACTTAAATCAA AAAATCGCCCAATTGGTTCCTTCCTATTTGTTGGACCAACTGGTGTCGGAAAAACAGAACTTGGACGCACGCTAGCTCGT GAATTATTCGGTACTAGTGAAGCGATGATTCGTTTAGACATGAGTGAATTCATGGAAAAACACAGCGTCTCTAAATTAAT CGGTTCCCCTCCTGGCTATGTTGGTCACGAAGAAGCTGGACAATTAACAGAAAAAGTTCGTCGCAATCCGTATAGCATCA TTTTGTTAGACGAAATCGAAAAAGCACATCCAGACGTTCAACATATGTTCCTGCAAATTTTAGAAGACGGTCGACTAACT GATTCACAAGGACGTACAGTGAGCTTTAAAGATACAGTCATCATTATGACAAGTAACGCTGGCGCAACTGACACAGAAGC TTCTGTCGGCTTTAATACAACAACCGAATCAAAACTTGAAAAAGGTTCTGACATCTTAGCAAAATTAGGTGCATACTTCA AGCCAGAATTCTTAAACCGTCTAGACAGCGTCATTGAATTTAAATCCCTAGAAAAAGACGATTTAGTACAAATCATCGAC TTAATGCTCGTTGATTTAAATGAAATGCTCGCTCAAGAAGATGTGACAATCGATGTTTCTAAAGAAGTAAAAGAACATTT GATTGACCTTGGTTATGACCCTAAATTCGGAGCACGTCCACTACGCCGGACTATCCAAGAACACCTAGAAGATGCCATTG CCGACAGTTTAATTGAACAACCAGAAGCAAAACATCTCGTTGCAACCCTTAACGATAATAAAGAAATTACTATAACAGAA CAAGTAACAGTGTAA Protein sequence : MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGANEFPGASGSPFDDIFRQLSGAASQANREQRSQANAQ VQTQTAGGGNGLLDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGEV PSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQ MIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALSAAVELSARYIQDRHLPDKA IDLMDEVGSKYNLSIEKLDENTVSERVARLEEEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAII EEKTGIPVGRLQEDEQSKMKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLAR ELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLT DSQGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTESKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIID LMLVDLNEMLAQEDVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDAIADSLIEQPEAKHLVATLNDNKEITITE QVTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-156 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LMHCC_1625 | YP_002350581.1 | negative regulator of genetic competence ClpC/mecB | VFG0080 | Protein | 0.0 | 99 |
| LMHCC_1625 | YP_002350581.1 | negative regulator of genetic competence ClpC/mecB | VFG0079 | Protein | 3e-160 | 53 |
