Gene Information

Name : rph (LMHCC_1415)
Accession : YP_002350374.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 1432680 - 1433426 bp
Length : 747 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGAGTTGATGGAAGAGAAAGTAATGCATTACGAAATATTGAAGTAACACCAGATTATTTAATGCATCCAGAAGGTTC
TGTGCTAATTGCATCAGGAAATACAAAAGTTATCTGTTCTGCAAGTGTAGAAACAAAAGTGCCACCATTTATGCGAGGAG
AAGGCCGCGGCTGGATTTCTGCAGAATACTCGATGTTACCACGAGCAACAAACACCCGAAATATCCGTGAATCTTCAAAA
GGTAAAGTTACTGGCAGAACAATGGAAATTCAGCGTTTAATCGGACGTGCGCTCCGTGCTGTTGTTGATTTAGATGCCCT
TGGTGAAAGAACGATTTGGCTCGATTGCGACGTTATCCAAGCAGATGGAGGTACTCGTACAGCTTCTATTACTGGCGCAT
TCATCGCCATGGTTATGGCAATTGCCAAACTAGACGAAGCAGTACCATTTGCTAAATTCCCAGTCAAAGATTTCCTAGCA
GCAACAAGCGTAGGCGTTTTAGAAGAAGGCGGCACCGTACTTGACCTTAACTACGTAGAAGACAGTGCAGCGCAAGTTGA
CATGAATATTATCATGACTGGTAGCGGCGCTTTTGTAGAACTTCAAGGAACTGGCGAAGAAGCTACATTCTCGGAAACAG
AACTGGCTGAACTAATTGCCCTAGGTAAAAAAGGAATTAGCGAACTAATCGAAATCCAAAAAGAAACACTCGGAGACAAA
GTCACAGCGCGGATTAAAGGAGAATAA

Protein sequence :
MRVDGRESNALRNIEVTPDYLMHPEGSVLIASGNTKVICSASVETKVPPFMRGEGRGWISAEYSMLPRATNTRNIRESSK
GKVTGRTMEIQRLIGRALRAVVDLDALGERTIWLDCDVIQADGGTRTASITGAFIAMVMAIAKLDEAVPFAKFPVKDFLA
ATSVGVLEEGGTVLDLNYVEDSAAQVDMNIIMTGSGAFVELQGTGEEATFSETELAELIALGKKGISELIEIQKETLGDK
VTARIKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-56 53