Gene Information

Name : rdgB (LMHCC_1414)
Accession : YP_002350373.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Unknown
Product : nucleoside-triphosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 1432065 - 1432676 bp
Length : 612 bp
Strand : -
Note : hydrolyzes non-standard nucleotides such as xanthine and inosine

DNA sequence :
ATGAGTAAAATTATTATCGCCACCGCAAACAAAGGAAAAGCAAAAGAATTCGAAAAAATCTTTGCGAAATTTAATATCGA
AGTAGCAACCCTTGCTGATTTTCCAGAAATTGGTGAAATAGAAGAAACTGGAACAACCTTTGCCGAAAATGCCGCTCTTA
AAGCAGAAACGGTCGCTAGCGTGTTAAATCAAACCGTCATTGCTGATGATTCTGGTTTAATCGTAGACGCGCTTGACGGA
GCTCCTGGCGTCTATTCCGCACGTTATGCAGGTGTCGCGCACGATGATGCCAAAAATAACGAAAAACTACTTAAAAACTT
AGAAGGTGTTGAACCGGACAAAAGAACGGCTCGTTTCCACTGTACACTTGCTGTAGCCACACCTTCTGAGAAAACATCTT
TTTATACCGGTGAAGTAGAGGGCGTTATTGCAGAACAATTGTGTGGAACAAATGGTTTCGGTTATGATCCACTATTTTTC
TTACCAGAATTCGGTCTTACAATGGCAGAAATTCCAGCAGAGAAAAAGAACGAAATCAGCCACCGTGCTAATGCCATTAA
ACAACTAGAAAAAGATTTAGCAGAAGTAGTAGAAAAAGTAACCAAAAAGTGA

Protein sequence :
MSKIIIATANKGKAKEFEKIFAKFNIEVATLADFPEIGEIEETGTTFAENAALKAETVASVLNQTVIADDSGLIVDALDG
APGVYSARYAGVAHDDAKNNEKLLKNLEGVEPDKRTARFHCTLAVATPSEKTSFYTGEVEGVIAEQLCGTNGFGYDPLFF
LPEFGLTMAEIPAEKKNEISHRANAIKQLEKDLAEVVEKVTKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 2e-18 48