Gene Information

Name : LMHCC_1375 (LMHCC_1375)
Accession : YP_002350334.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Unknown
Product : phage portal protein, HK97 family
Function : -
COG functional category : S : Function unknown
COG ID : COG4695
EC number : -
Position : 1408917 - 1410047 bp
Length : 1131 bp
Strand : -
Note : -

DNA sequence :
TTGGGATTTCTTTCGGAGATATTTAAACGGAACAAAGAAATTGAGTGGATGTGGGATTTAGAGTTTTTAGAAGATAAAAC
AACAAAGGTTTATTTGAAGAAAATGGCTTTAAATACGTGTGTAAAACATATAGCACGAACGATCGCCAAATCTGATTTTA
GATTGAAAAGTGGAGAAAGCAGTGTACGAGACGGATTGTATTATAAATTAAATGTTCGTCCAAATACAGATATGAGTTCG
AGTTCTTTCTGGGAAAAAGTGATCTATAAATTAATCTATGATAACGAGTGCTTAATCGTCCTTTCAGATACGGACGATTT
TTTAATTACTGATAGTTATGTTAGAAAAGAGTTCGCGCTTTATCCGGATGTTTTTGAAGGGGTTACGGTGAAAGATTATC
GTTATAATCGTAATTTTAGTATGGATGATGTGATTTTTCTGGAATATGGAAATGAGCGACTAGCTGCATTTACTGATGGC
ATGTTTGAGGATTACGGTGAGTTATTTGGTCGCATGATTCGGGCGCAAATGCGTAACTTCCAAATTCGTGGAGCTGTTAA
TTTTAAAATGGCAGGTATTGCGGATGATGAAAAACAAAAAAAATTACAGACTTACATCGACAAACTGTATGCTGCATTTA
ACAATAATGAGATTGCCATCGTTCCTCAACTAGAAGGCTTTAACTATGAAGAGTTTGGAACGTCTAGCGTCAATAGTAGC
CAAAATTTTGATGAGATCAAAAAACTTCGAAAAGAAATGATTGATTATGTAGCTAGTATTCTCGGCATTCCCTCTGCTCT
GCTACATGGGGATATGGCAGATTTGAGTAATAATATGAAAGCATATATGGAATATTGTATTGATCCTCTCACTAAAAAGC
TAGAAGATGAATTAAACGCTAAATTATTTACTTCCAACGAGTTTTTAGCGGGTGAACATATCAAAATCATACACAAAAAA
GACATTATAGAAAATGCAGAAGCTGTAGATAAGTTGGTTGCCTCTGGTTCATTTAATCGTAATGAAGTTCGAGAATTATT
GGGCGCTGAACGAGTAGATAATCCGGAATTAGATAAATATTTAATTACTAAAAACTATCAGTCAGCAGATGAAGGAGGTG
AGAATGGATGA

Protein sequence :
MGFLSEIFKRNKEIEWMWDLEFLEDKTTKVYLKKMALNTCVKHIARTIAKSDFRLKSGESSVRDGLYYKLNVRPNTDMSS
SSFWEKVIYKLIYDNECLIVLSDTDDFLITDSYVRKEFALYPDVFEGVTVKDYRYNRNFSMDDVIFLEYGNERLAAFTDG
MFEDYGELFGRMIRAQMRNFQIRGAVNFKMAGIADDEKQKKLQTYIDKLYAAFNNNEIAIVPQLEGFNYEEFGTSSVNSS
QNFDEIKKLRKEMIDYVASILGIPSALLHGDMADLSNNMKAYMEYCIDPLTKKLEDELNAKLFTSNEFLAGEHIKIIHKK
DIIENAEAVDKLVASGSFNRNEVRELLGAERVDNPELDKYLITKNYQSADEGGENG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1940 YP_494591.1 phage portal protein Not tested ¥ÕSa3 Protein 7e-92 48
SAUSA300_1940 YP_494591.1 phage portal protein Not tested ¥ÕSa3 Protein 7e-92 48
SAKOR_01944 YP_008492132.1 Portal protein Not tested ¥ÕSa3 Protein 7e-92 48
SAV1965 NP_372489.1 hypothetical protein Not tested ¥ÕSa3 Protein 7e-92 48
SA1776 NP_375074.1 hypothetical protein Not tested ¥ÕSa3 Protein 7e-92 48
SAOV_1102 YP_005736597.1 Portal protein, phage associated Not tested ¥ÕSa2 Protein 2e-90 47
SH1774 YP_253689.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-79 44