Gene Information

Name : LMHCC_1374 (LMHCC_1374)
Accession : YP_002350333.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Unknown
Product : Clp protease domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : -
Position : 1408204 - 1408920 bp
Length : 717 bp
Strand : -
Note : Clp protease domain protein

DNA sequence :
ATGAAATTAGAGGTCAAAGGAACAATCATATCGAGCAATCAAAAATGGATTTACGATATGCTTGATATGGAAAGCACTAG
CCCACGCGATATCATTTTACCTGAAAACAATGAGCCGGTTGATGTAATTATCAATTCTGGCGGAGGCGATGTGTATGCTG
GTAGTGAAATTTATACTACATTGAAGGGCTATAATGGCACTGTAAATGTGCAAGTTGTAGGCATTGCTGCTAGTGCGGCT
TCGGTCATTGCTATGGCGGGAGATAAAGTGGAAATTAGTCCTACAGCCCAGATCATGGTGCACAATGTTGCTTCCGGAGT
GTTTGGAGATTATCGAGATCTTGAACATGAAGCTAAAGTTTCGAAAGGCTTCAATGTATCTGTGGCAAACGCATATATGG
ACAAGACTGGAAAGAACATGGATGAATTATTAAATCTAATGGGTGAAACTACATGGTTTAACGCACAACAGGCAGTAGAA
GCCGGTTTTGCCGACGAAGTAATGTTTTCTAATGAGAAAGCACCGCAATTAGTTGCCAGTCTCTCACCGGTAATACCACA
GGATGCAATCGAGAAAATCATAAATAATATTAAACCACCGCAGTTAGATATCGATGCAATTGTAGGAAAAGTAATAAACC
AATTAGAACAAACAAATACTAAAGAAGAGAAACCACGAAAGGAAAATAAAAATCCTTTCAAACGGTTTCTTTTTTAA

Protein sequence :
MKLEVKGTIISSNQKWIYDMLDMESTSPRDIILPENNEPVDVIINSGGGDVYAGSEIYTTLKGYNGTVNVQVVGIAASAA
SVIAMAGDKVEISPTAQIMVHNVASGVFGDYRDLEHEAKVSKGFNVSVANAYMDKTGKNMDELLNLMGETTWFNAQQAVE
AGFADEVMFSNEKAPQLVASLSPVIPQDAIEKIINNIKPPQLDIDAIVGKVINQLEQTNTKEEKPRKENKNPFKRFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 3e-37 47
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 3e-37 47
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 3e-37 47
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 3e-37 47
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 4e-37 47
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 3e-37 47
SEQ_0824 YP_002746160.1 phage ClpP protease Not tested ¥ÕSeq2 Protein 8e-21 44