Gene Information

Name : LMHCC_1373 (LMHCC_1373)
Accession : YP_002350332.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1407026 - 1408177 bp
Length : 1152 bp
Strand : -
Note : Cps

DNA sequence :
ATGACTATCAAATTAAAAAACAACCTCGCGAATTACGAGGAAAAACGCACAGCTTTTGTTAATGCTGTGAAGAATGAAGA
AACGCAGGAAATTCAAAACGAAGCATATGTGGAAATGGTAGATGCAATGGCTGCCGACATCATGGATCAAGCTAAGAAAG
AAGCACGACAAGAAGCAGATCAATACATTTCAGCTAGCCGAACAGACAAAAATATCACGAACGAAGAAATTAAATTCTTT
AATGATATTAATAAAGAAGTTGGCTACAAAGAAGAAACATTGCTTCCGCAAACAGTTGTTGATGAAATTTTCGAAGATTT
AACAACTGAACATCCTTTCTTAGCTTCCATCGGAATGCGTACAACTGGTTTGCGAACTAAGTTCTTGAAATCAGAAACTA
GCGGGGTAGCGGTTTGGGGTAAAATCTTTGGCGAAATTAAAGGTCAATTGGATGCAACGTTCAGTGACGAAGAATCTATT
CAAAACAAACTGACTGCTTTTGTAGTGGTTCCTAAGGATCTTGAAAAATTCGGTCCAGCATGGGTCAAACGTTTTGTTGT
TACTCAAATTGAAGAAGCGTTTGCTGTTGCACTCGAAAGTGCGTATATTGTTGGGGACGGTAATGACAAACCCATCGGCT
TGAATCGTAAAGTTGGAAAAGGTAGTACGGTAGTAGATGGCGTATATGCTGAAAAAGCAGCTACTGGTACACTAACGTTT
GCTGATCCAAAAACAACTGTGAATGAATTGACAGATGTGTATAAATACCACTCTGTGAAAGAAAATGGACATCCACTGAA
CGTTGCAGGTAAGGTTACGTTGCTAGTCAATCCGACAGACGCATGGGATGTTAAGAAACAGTACACAAGCTTAAATGCAA
ACGGCGTGTATGTTACGGCACTTCCGTTCAATTTGAACATTATCGAATCATTGTTTGTTCCAGAAAAGAAAGCCATTTCT
TATGTGGCCGAACGTTACGATGCATTGATTGGTGGACCATTGGATATTGGTACTTACGATCAAACACTTGCTATTGAAGA
TTTAAATCTTTACGCTGCAAAACAATTTGCGTACGGTAAAGCGAAAGACGATAAAGCTGCTGCTGTGTGGACACTAAACA
TTAATCCAGCGGAACAAACTCCGGAAGGGTGA

Protein sequence :
MTIKLKNNLANYEEKRTAFVNAVKNEETQEIQNEAYVEMVDAMAADIMDQAKKEARQEADQYISASRTDKNITNEEIKFF
NDINKEVGYKEETLLPQTVVDEIFEDLTTEHPFLASIGMRTTGLRTKFLKSETSGVAVWGKIFGEIKGQLDATFSDEESI
QNKLTAFVVVPKDLEKFGPAWVKRFVVTQIEEAFAVALESAYIVGDGNDKPIGLNRKVGKGSTVVDGVYAEKAATGTLTF
ADPKTTVNELTDVYKYHSVKENGHPLNVAGKVTLLVNPTDAWDVKKQYTSLNANGVYVTALPFNLNIIESLFVPEKKAIS
YVAERYDALIGGPLDIGTYDQTLAIEDLNLYAAKQFAYGKAKDDKAAAVWTLNINPAEQTPEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1104 YP_005736599.1 Phage major capsid protein Not tested ¥ÕSa2 Protein 2e-105 57
SA1774 NP_375072.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-104 56
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 1e-104 56
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 1e-104 56
SAKOR_01942 YP_008492130.1 Major capsid protein Not tested ¥ÕSa3 Protein 1e-104 56
SAV1963 NP_372487.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-104 56
SH1772 YP_253687.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-92 51