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Name : treC (LMHCC_1319) Accession : YP_002350278.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1363971 - 1365617 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGACAAAGTTTGCTCAAAAAACAATTTATCAAGTGTATCCGAAATCCTTTTATGATACGACTGGCGATGGTACTGGGGA TATTCCCGGTATCACCGCCAAGCTTGATTATTTACAAAAACTCGGAATTGAGATGATTTGGCTGAATCCATTTTATCCTT CTCCGCAAAATGATAACGGCTATGATATCGCTGACTATACCGCGGTTGATCCTTTATTTGGTACGATGGACGATGTGACA ACGCTTATCAAGGAAGCGAAAAAAAGAAATATTGGGATTATGATTGACTTAGTATTAAATCATACTTCAACAGAGCATCC TTGGTTTAAAAAAGCGCTTGCTGGTGATCCATTCTATCGTGATTTTTACTATTTCCGCCCAGCAAAAGCCGATGGTTCCC CTCCAACAAATTGGGTTTCCAAATTCGGCGGTAATGCTTGGGAAAAATTGCCTGACTCCTCTGAGTACTATTTGCATTTA TACGATGTTACTCAAGCTGATTTAGACTGGGCCAATCCGAATGTACGCGAGGCACTCTTTGATGTCGTGAATTTTTGGAT TGATAAAGGCGTGGAAGGTTTTCGTTTAGATGTATTAAATGTGATTGCCAAACCTAAGTTTTTAGAAGATGATTTTGAGG GTGATGGCCGTCGTTTTTATACAGATGGACCAGGAATTCATGCTTATTTAAAAGAACTACATGAACGAACTTTTGGCGAT AAACCTATTGTAACAGTTGGAGAAATGTCATCTACGGATATTGATAACTGCATTCGTTATAGTAATCCAGACGAAAAAGA ATTATCGATGGTTTTTCATTTCCATCATTTGAAAGTAGACTATCCTGATGGAGAAAAATGGCGTTTAGCGGATGTGAATT TCGAGAACTTGAAATCTATTTTCCATACGTGGCAAGTTGCGATGTCAGATGAAAATGGTTGGGATGCGCTTTTCTGGAAC AACCATGACCAACCTCGAGCCCTTGGTCGCTTTGCTTCCGACAAGCCGGAACATTATTATCATTCTGCGACCCTACTTGG CGCAACGATTCATTTTATGCGAGGTACACCGTTTGTTTATATGGGAGAAGAAATTGGTATGATGAATCCAAAATTCCCTA CCATTGATGATTATGTGGATGTGGAAACGCTCAACCATTTTGATATTTTACAAAAAAACGGACTTAGTGAACAGGAAGTA ATGGAGATTATTAAAGAACGTTCGCGCGATAACAGCCGGACTCCTATGCAATGGGACGATTCGCAAAATGCCGGTTTTAC AACTGGTACCCCTTGGCTAAAAGTGGCTGATAATGCAAAGGAAATAAATGTTCAAACTGCTTTATCTAATAAAGCGAGCA TTTTCTATTTTTACCAAAAACTAATCGCACTCCGGAAAGAGCATCCTGTCATTCAAACGGGTGATTACACACCATGTTTG ACGGAAGAAGATTCTATTATCGCCTACAAGCGTTCAAACGAAACTACTTCCCTTCTTTCCATTCATCATTTTGGTTCCGA GAAGAAAAAAATTCAACTGCCAACTGAGTTTTTAAATGCTGAAGTACTTCTTTCTAATTATGAGCGCCAGAGAATCAGTT CTGAACTGGAATTAGCGCCATATGAAACATTAACATTAATACAATAA Protein sequence : MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVT TLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHL YDVTQADLDWANPNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRRFYTDGPGIHAYLKELHERTFGD KPIVTVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSDENGWDALFWN NHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQKNGLSEQEV MEIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNAKEINVQTALSNKASIFYFYQKLIALRKEHPVIQTGDYTPCL TEEDSIIAYKRSNETTSLLSIHHFGSEKKKIQLPTEFLNAEVLLSNYERQRISSELELAPYETLTLIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-108 | 42 |
