Gene Information

Name : LMHCC_1147 (LMHCC_1147)
Accession : YP_002350109.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Unknown
Product : glycine betaine/carnitine/choline transport ATP-binding protein opuCA
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1185939 - 1186922 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence : 
ATGATTCGTTTTGATAATGTATCCAAAAAATACAGTGATGATAAAACGGCAGTAAACAATGTAACTTTGGACATAAAAGA
CGGCGAGTTCTTTGTTTTCATCGGACCGAGTGGTTGCGGGAAAACAACAACGCTAAAAATGATTAATCGCTTGATTCCAC
TGACAACTGGAACCATTTATATTAATGAAAAGCGAATTAGTGATTATGATATTCATGAACTTCGCTGGGATATCGGCTAT
GTTTTACAACAAATTGCGCTCTTTCCTCATATGACTATTGAAGAAAATATCGCTATCGTTCCGGAATTAAAGAAATGGAG
CAAGGAAAAAATCCATGACCGGATTACGGAATTATTAGACAGTGTTGGTTTAGATCCTGAAAGTTACCGTCACCGTAAGC
CAGCTGAACTTTCCGGCGGAGAACAACAACGTGTCGGCGTTGTTCGGGCCCTTGCAGCAGATCCAGGAATTATTCTGATG
GATGAACCTTTTAGTGCGCTTGATCCGATTTCTCGCCAACGTTTGCAACAAGATATTTCCGCACTTCAAAAGAAAATCAA
GAAAACGATCGTATTTGTTACCCATGATATGCAAGAAGCTTTAGCGCTTGGTGACAGAATTTGTGTGATGCAAGGTGGCG
AAATTGTCCAAGTAGCAACACCGCAAGAAATTATGAAAAATCCAGAAAATGATTTTGTTAAAGATTTCTTAGCATCTGGA
CATGCTTTCAATACGCCAATTTTAGAGGCTAGCTTTACAGTGAATGATTTAATTGAAGCAGACCTGTTTTATGCGTATCA
AACTAGTGATGGAACTCTTGGGATTTCAGCTAAGGAGCCTGTCGAAAACCTTGTTCGTCGAATCGCGGAAGAGCAATCGA
TTCCTGTCACGGACGAAGCAGGCAACTTTATAGGTACAGTTTCCAATAAACATGTGATGCAATTCTTAGCGCGGCATCTG
GAAAGTACAGGTGAGCTTGTATGA

Protein sequence : 
MIRFDNVSKKYSDDKTAVNNVTLDIKDGEFFVFIGPSGCGKTTTLKMINRLIPLTTGTIYINEKRISDYDIHELRWDIGY
VLQQIALFPHMTIEENIAIVPELKKWSKEKIHDRITELLDSVGLDPESYRHRKPAELSGGEQQRVGVVRALAADPGIILM
DEPFSALDPISRQRLQQDISALQKKIKKTIVFVTHDMQEALALGDRICVMQGGEIVQVATPQEIMKNPENDFVKDFLASG
HAFNTPILEASFTVNDLIEADLFYAYQTSDGTLGISAKEPVENLVRRIAEEQSIPVTDEAGNFIGTVSNKHVMQFLARHL
ESTGELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-51 49
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-51 49