|
Name : LMHCC_1135 (LMHCC_1135) Accession : YP_002350097.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : pyridine nucleotide-disulfide oxidoreductase family protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1173191 - 1174531 bp Length : 1341 bp Strand : + Note : - DNA sequence : ATGGCAAAATATACATATGATGTCGTAATAATCGGAAGCGGTGCAAGTGGTACAACAGTAGCATTTGAGGCGCAGGCGGC CGGTTTAAAAGTAGCTGTAGTAGAAGAGCGCAGTTGGGGCGGAACGTGTGTCCTCAGAGGCTGTGACCCTAAAAAAGTTC TCGTCGGTGCAAGCGAAGCAAGAAATCTTTCTACAAGACTACGTGGTAAAGGCATTAAGCAAGCAGCGACGATTAGCTGG ACTGATTTAATGGCATTTAAAGAAACATTTGTCGAGAATGTTCCCGAAAGTCGTTTGGAAAGCTTTCAAGAAGCCGGGAT TGAGACATTCTTTGGTGCAGCTAGTTTCCAAGATTCCCATTCCTTGCAAGTCGGCGATGATTTAATTTATGCTGAAAAAA TTGTCATCGCAACAGGAGCAACACCAAGCACGTTAAAAGTAGAAGGGCAAGAATACATTCAAACCAGTGATGATTTTTTA TCACTTGAAAAACTCCCTGATTCTGTTGTGTTTATTGGTGGTGGCTATATTTCATTTGAATTTGCCTCCATAGCACTCGC AGCAGGGAGAGAAGTGCATATGATCCACCATAATAGCGAACCTTTAAAAAAATTTGATCCTGATTTCGTGGCTGCATTAG TGTCCAATATGAAAGAGGAAGGTATCCATTTCCATTTTGACACAGATATTACGAAGGTTGAAAATAAGGGGGAAAAACTG CATATTCATGGCAAAGATGGATTTTCATTACAAACAGATTTAATTATTGGAGCAACTGGCAGAAAACCAAACATTGCGCA TCTATCATTGGAAAATGCCAACATTGACTACACTAAAAAAGGCATTATCGTTAATGAAAAACTTCAAACCACTAATAACC CTCATATCTACGCATGTGGCGATGTCGCGGCAACAAAAGGAGCACCTTTAACACCCGTTGTCAGCATGGAAGCAGCATTT GTTGCTAAAAATGTCATTGGCGGCGACGAAAAAATAATTTATCCAGCAATACCAAGCGTCGTTTTTACGAGTCCCAAACT GGCAAGCATTGGTATAAGTGCAGAAGAAGCAAAAGCGCATCCAGAAAAATATCAAATTAAAAATCACGACACAACAAATT GGTACACTTATAAACGAACCAATGAACAAATTGCGCTCGCAAAAATCATTGAAGATAGAGAGACAGGGCAAATCAAAGGC GCTCATTTTCTTAGTGAAGAAGCGGATTATATAATAAATTACATTGCCATCTTAATGAAAGCAAACCTAACTTTAGCTGA TTTACAATCTGTTATTTTTGCTTATCCATCTCCTGCAAGTGACTTAACTGCTTTGAACTAA Protein sequence : MAKYTYDVVIIGSGASGTTVAFEAQAAGLKVAVVEERSWGGTCVLRGCDPKKVLVGASEARNLSTRLRGKGIKQAATISW TDLMAFKETFVENVPESRLESFQEAGIETFFGAASFQDSHSLQVGDDLIYAEKIVIATGATPSTLKVEGQEYIQTSDDFL SLEKLPDSVVFIGGGYISFEFASIALAAGREVHMIHHNSEPLKKFDPDFVAALVSNMKEEGIHFHFDTDITKVENKGEKL HIHGKDGFSLQTDLIIGATGRKPNIAHLSLENANIDYTKKGIIVNEKLQTTNNPHIYACGDVAATKGAPLTPVVSMEAAF VAKNVIGGDEKIIYPAIPSVVFTSPKLASIGISAEEAKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIEDRETGQIKG AHFLSEEADYIINYIAILMKANLTLADLQSVIFAYPSPASDLTALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 1e-90 | 44 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 2e-90 | 44 |
