Gene Information

Name : LMHCC_0011 (LMHCC_0011)
Accession : YP_002348991.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Resistance
Product : macrolide ABC transporter ATP-binding protein/permease
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 11682 - 12353 bp
Length : 672 bp
Strand : +
Note : macrolide export ATP-binding/permease MacB

DNA sequence :

ATGACTTTAATAATGAAAAATATTTCTAAAAATTATCAAGATGGCGAGCAAGTCATCGAAGTATTGAAAAATGTTTCTTT
AGAAGTAGCACAAGGAGAATTCGTTGCAATCGTCGGACCTTCTGGCGCTGGGAAAAGTACATTTTTATCAATCGCAGGCG
CTTTATTATCTCCAACAGAAGGCGAAATTGCCATTGGTGGAACGACATTAAATAACATGTCTGAAAAAGCATTAACGAAG
GTGCGACTCGACAAAGTTGGCTTTATTTTCCAAGGTGCCAACTTAATTCCTTACCTAAGTGTTCGTGACCAACTACTCGT
CATTGCGGAATTATCCGGTGAAAAAGGTAGCGCTGCGAAAGAAAGAGCAGATAAATTGCTTCAAGAATTAGGCTTAACCG
CGCGCCAAAACAATTATCCGGAGAGTTTGTCAGGTGGCGAAAAACAACGCGTTGCCATTGCTAGAGCACTCATGAATGAT
CCAGATATTATTCTAGCCGATGAACCCACAGCTAGTTTAGATGCCAACCGCGGACATAAAGTAGTTCAAATGATTGCAGA
TGAAGTAAAACGGAAAAATAAAGCTGCCATCATGGTTACACATGACGAACGAGTGTTAGATTTAGTCGACCGTGTGATTC
GAATTGAAGATGGCTATTTAAAAGCAGAATAA

Protein sequence :

MTLIMKNISKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGTTLNNMSEKALTK
VRLDKVGFIFQGANLIPYLSVRDQLLVIAELSGEKGSAAKERADKLLQELGLTARQNNYPESLSGGEKQRVAIARALMND
PDIILADEPTASLDANRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKAE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	6e-44	47
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	5e-50	45

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LMHCC_0011	YP_002348991.1	macrolide ABC transporter ATP-binding protein/permease	NC_012469.1.7686878.	Protein	5e-40	44
LMHCC_0011	YP_002348991.1	macrolide ABC transporter ATP-binding protein/permease	CP001581.1.gene798.p	Protein	2e-37	42
LMHCC_0011	YP_002348991.1	macrolide ABC transporter ATP-binding protein/permease	CP001581.1.gene598.p	Protein	2e-36	42
LMHCC_0011	YP_002348991.1	macrolide ABC transporter ATP-binding protein/permease	NC_012469.1.7685735.	Protein	3e-33	41