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Name : polA (LMHCC_1004) Accession : YP_002349966.1 Strain : Listeria monocytogenes HCC23 Genome accession: NC_011660 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1036228 - 1038855 bp Length : 2628 bp Strand : + Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : GTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCTTTTTATGCGTTACCGCTTTTAAATAACGATAA AGGTGTTTACACAAATGCGGTGTATGGTTTCGCAATGATGTTGATGAATGTACTCGAAAAAGAAAAACCTAGCCATGTGC TCGTTGCATTTGATGCTGGAAAAACAACTTTCAGACATACAACATTTAAAGGTTATAAAGGCGGACGTCAAAAAACTCCA AGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAACTTTTAACGGCGTATGATATCCCGCAATATGAACTTGCCAATTA CGAGGCAGATGATATTATCGGAACATTGACGAAAAAAGCGGAAGCAGATGGAATGGAAGTAGCAATCATTACCGGAGACC GCGACTTAACGCAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAAAAAGGTATAGCCGATATGGAAACCAACACA CCAGAAACACTAAAAGAAAAATACAATCTGACTCCTGAACAAATCATTGATATGAAAGGTTTAATGGGCGATTCCTCCGA TAATATTCCTGGTATTCCAGGCGTTGGTGAAAAAACAGCCTTAAAACTCTTACATGAATTTGGCGGAACGGTGGAAAGTG TGTTAGAGCATGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTACTGGAAAATAAAGAATTAGCTATTTTAAGT AAAGAACTAGCTACAATCAATGTAGATTCACCGATTGAATGCACAGTTGAAAGCACAAAATATGACGGTTATCAAACGGA AAAAGTAATTCCTTTATTAAAAGAAATGAACTTTACAACACTTTTGAAGAATATCGAGGGAGATACACCGGAAGAAGCAA AAGAATTAAAAGAACTATCTTTTGAAATCGTAACAGAATTAAAAGAAAAACATTTTGGTGGGAAAACTGCGCTTTATGTG GAGTTAGAAAATGATAATTATCATACATCTAATTTCATTGGATTAACAGTACATTCTAGCCAAGGGACGTATTTCTTTAC GAAGGAAACTGCTGAAAATAGTGAGGCGTTCCGTGAATGGGTAGAAAGTGAACAAACAAAAGTAGTATATGATGCGAAGA AAACAATGGTTGCAATGAATCGCATTGGTTTAGCGATTTCTGGTATTACCTTTGATATCATGTTAGCTTCTTATTTACTA AATCCATCTGACTCGATTGATGATTTTACAAGCGTTGCAGTAAGACATGATTACACAGAAGTCGAAACGGATGAGGCAGT CTACGGAAAAGGCGCCAAACGTAGCACACCAGAAGAAAGCATTGTTGCGTCCCACTTAGCTAGAAAAGCGGTAGCCATTG CTGACTTAGAGAAAAGACTGGTTGCTGATTTAGAGGAAAATGAACAATTAGCTTTGATGGAAGATTTAGAGTTGCCACTG ACTTTTGTATTAGCAGAAATGGAAATGCAAGGGGTTAGTGTAGATACAGAACGTCTAGAGAATATGAAAGTGGAGCTAGC GGGTAGACTGAAAACATTGGAAGAGTCGATCCATTCTCTAGCCGGCGAAGCATTCAATATTAATTCACCGAAACAACTAG GTGTGATTTTATTTGAAAAGCTTGGTCTCCCAGCGGTCAAGAAAACAAAAACAGGTTATTCAACTGCTGCCGATGTACTG GAAAGTTTATCTGGTAAACACGCGATTATTGATGAAATTTTGTTATATCGTCAACTTGGTAAAATTCAGTCCACTTATAT CGAAGGACTGCTTAAAGTGACAGATAAAGAAACACATAAAGTGCACACACGTTTCAACCAAACATTAACACAAACAGGAC GCTTAAGTTCAGTTGATCCGAACTTGCAAAATATCCCTATTCGTTTAGAAGAAGGACGGAAAATAAGACAAGTTTTCGTA CCGAGTAAACCAGGTTGGAAAATGTTTTCAGCCGATTATTCGCAAGTAGAGCTGAGAGTCTTAGCACATATTTCGGAAGA TGAAAATTTAATTTATGCATTTAAGCACGATTATGATATTCATACGAAAACGGCGATGGACGTGTTTCATGTTGAACAAG ACGAAGTGGATTCATTAATGCGTCGTCAAGCTAAAGCGGTCAACTTTGGTATTGTATATGGAATTAGTGATTATGGGCTT TCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTCATTGATCGTTACTTTGTGAGTTATCCAGCCGTGAAAGA ATATATGCAAGATATCGTTCGTTTTGCGAAAGAAAAAGGCTATGTAGAGACCATTTTACATCGTCGTCGGTATATTCCAG AGATTGTCAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACGGCGATGAACACGCCTATTCAAGGTAGTGCCGCT GATATTATCAAAAAAGCGATGATTCTCATGAGCGAGCGTTTAGTATCCGAAAAATTAGAAGCCAAATTATTACTTCAAGT GCACGATGAATTGATCTTCGAAGCACCTGAAGCCGAAATAGCTAAATTAGAAGAAATTGTCCCAGATGTTATGGAAAATG CAGTAGAGCTTTCTGTACCGCTAAAAGTAGATAGCGCATTTGGTGACACTTGGTACGACGCGAAATAA Protein sequence : MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTP SELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT PETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEEAKELKELSFEIVTELKEKHFGGKTALYV ELENDNYHTSNFIGLTVHSSQGTYFFTKETAENSEAFREWVESEQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLL NPSDSIDDFTSVAVRHDYTEVETDEAVYGKGAKRSTPEESIVASHLARKAVAIADLEKRLVADLEENEQLALMEDLELPL TFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEAFNINSPKQLGVILFEKLGLPAVKKTKTGYSTAADVL ESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFV PSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAA DIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
