|
Name : rplS (THA_59) Accession : YP_002333908.1 Strain : Thermosipho africanus TCF52B Genome accession: NC_011653 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 60951 - 61298 bp Length : 348 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAGTATGGATAACCTTGTTAGAATTATTGAAAAAGATCAGATTAAGGATGTTCCAGAATTTAGACCTGGTGATACAGT AAAAGTTTATGTTAGATTTAAAGAAGGAAACAAAGAGAGAACACAAGCATTTGAAGGAATTGTAATTTCTATGAGAGGTT CTGGCATTAGCAAAACTTTTACAGTTAGAAGAATTGGTGCAAATGGTATTGGTGTAGAAAGAATTTTCCCATTGTATGCT CCAATAATTGAAAAGATTGAAGTTGTTAGAAGAGGAAAGGTAAGAAGAGCAAAATTATACTATTTAAGAGAAGTACGCGG AAAGGTGAAAATTAAGGAGAGAAGGTAA Protein sequence : MSMDNLVRIIEKDQIKDVPEFRPGDTVKVYVRFKEGNKERTQAFEGIVISMRGSGISKTFTVRRIGANGIGVERIFPLYA PIIEKIEVVRRGKVRRAKLYYLREVRGKVKIKERR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-28 | 61 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-25 | 57 |
