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Name : serS (THA_487) Accession : YP_002334319.1 Strain : Thermosipho africanus TCF52B Genome accession: NC_011653 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 482461 - 483741 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATGTTAAATTATTAAGAAAAAATCCTGAAATATTTTATGATGCTATAAAGAAAAGAAATATGGATACAGAAAT TATTGACAAAATTTTAGAGGTAGATAAAGAATGGAGAGAACTCGTTGCAAAGGTAAATGAATTGAAAGCAAAAAGAAATG AGTTTTCTAAGCTAGTTGCAAAGGCAAAGGTTGAAAAGGATAATGAAAAAGCAAGCAAATTAATAGAAGAAAGTAAGAAA ATAGGAGAAGAGATAAAGAAAATAGAAGAGCAAGAAAAAAAATTAGAAGAGGAAATGCAAAATTTAGCATTGAATATTCC AAATATTCCAGCAGAAGATGTTCCATTTGGAAAAGATGAATCGGAAAATATCGAAATTAGAAGATGGGGAGAGCCTAGAA AGTTTGATTTTGAGCCAAAAGCTCACTGGGACCTTGGTCCTGAACTTTCAATGATGGATTTTGAAAGAGGTGCAAAATTA AGTGGTTCAAGGTTCACAGTTTTGTATAGCTATTTAGCAAGGCTAGAGAGAGCCTTGATTCAGTTTATGCTTGATGTTCA TACAAAAGAACATGGATATACAGAAGTTTGGGTGCCACAACTTGTTAAGAGAGATGCAATGCTTTGGACTGGTAAACTTC CAAAATTTGAGGAAGATGCATATTGTATTGAAAAAGATGATATGTTTTTAATTCCAACAGCTGAAGTTCCACTTGTGGCA CTTCATGCACAAGAAATACTTTCTGAAAAAGATCTTCCAATAAAATATACAGCGTATTCTGCATGTTACAGAAGGGAAGC AGGAAGCTATGGAAAAGATGTTCGTGGAATGATTAGACAGCATCAATTTGATAAGGTTGAGCTAGTATGGATAACAACTC CTGAAAGATCCTTTGAAGATCTTGAAAGGTTAACACAGGATGCAGAAAGAATATTACAGCTTTTGGAACTTCCTTACAGA GTTGTTTCTTTATGTAGCGGTGATTTGGGATTTGTTTCTGCAAAAACTTACGATATAGAAGTATGGCTTCCATCTTACAA TTCCTACAAAGAAATTTCTTCATGTAGTAACACTACAGATTTTCAAACAAGAAGATCTAATATAAGGTACAGAGGAAGTG ATAATAAATTGCATTATGCACATGCACTTAATGGATCGGGACTTGCTGTTGGGAGAACTTTAGTGGCCATTGTTGAAAAC TATCAGAACGAAGATGGAAGTATAACTGTTCCAAAAGTTTTAGTTCCCTACATGGGAGTTGAGAAAATAGAAGTTAAATA A Protein sequence : MIDVKLLRKNPEIFYDAIKKRNMDTEIIDKILEVDKEWRELVAKVNELKAKRNEFSKLVAKAKVEKDNEKASKLIEESKK IGEEIKKIEEQEKKLEEEMQNLALNIPNIPAEDVPFGKDESENIEIRRWGEPRKFDFEPKAHWDLGPELSMMDFERGAKL SGSRFTVLYSYLARLERALIQFMLDVHTKEHGYTEVWVPQLVKRDAMLWTGKLPKFEEDAYCIEKDDMFLIPTAEVPLVA LHAQEILSEKDLPIKYTAYSACYRREAGSYGKDVRGMIRQHQFDKVELVWITTPERSFEDLERLTQDAERILQLLELPYR VVSLCSGDLGFVSAKTYDIEVWLPSYNSYKEISSCSNTTDFQTRRSNIRYRGSDNKLHYAHALNGSGLAVGRTLVAIVEN YQNEDGSITVPKVLVPYMGVEKIEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-98 | 52 |
