|
Name : queA (THA_278) Accession : YP_002334119.1 Strain : Thermosipho africanus TCF52B Genome accession: NC_011653 Putative virulence/resistance : Unknown Product : S-adenosylmethionine:tRNA ribosyltransferase-isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 276732 - 277739 bp Length : 1008 bp Strand : - Note : Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step DNA sequence : ATGAAGCTTAGCGATTTTGATTATTACTTGCCAGAGGAGTTGATTGCTCAAACTCCTGCAGAACCGAGAGATTCTTCTAG ATTGATGGTGTTAAATAGAAAAGAAAAAACAATTGAGCATAGAATTTTTAGAGATATTGTTGAGTATTTAAAGCCTGGAG ATTTGCTAGTTAGAAATATTACAAAAGTAATTCCTGCAAGGCTATATGGTGTAAAAGAAACGGGAGCCAGAGTTGAAATT TTACTTTTAGAGAAAATAAGTGAAGGTGTTTGGGAGGCGTTGGTAAAACCGGGCAGTAAAGTTAAAAAGGGAACCAAAAT TATTTTATCTGAAGGCGTTGAAGTAATATGTAAAGATTATTCACAGCAAGGAGCAAGAATCTTAGAGTTTAATTGCAGTG ATGATAAATTATTTGAACTTGGAAATGCACCACTACCACCATATATAAAGAATCAGAAAGTTCCGTTTGAAAGATATCAA ACAGTATATTCAAAAGAAACTGGGTCGGTTGCAGCACCTACAGCTGGGCTTCATTTTACAGAAGAACTTCTTGAAAGGTT AAGGAATAAAGGTTTGGAATTTGCAGACTTAATCTTACATGTTGGACTTGGGACTTTTAGACCAGTAAAGGTTGAAGATA TAAGAGAGCATAAAATGCATTCAGAAAGGTACTATGTGCCAGCTGAAACGGTTAAAAAGATAAGAGAAACAAGGAAGAAT AAAGGAAGAATAATAGCAGTTGGGACAACCAGTGTAAGAACTCTTGAGACAATTGCAAGACTTCCTAATCAAGAAAGCTA CCATGGAAAAACTGATATATTTATTTATCCACCTTTTGAATTTAAATTGACAGATGCAATAATCACGAATTTTCATCTTC CAAAATCTACACTTTTAATGCTTGTTGCTGCTTTTGCAGGAAAAGATTTTATTCTAGAAGCTTATAATACCGCGGTAAAG ATGAAGTATAGATTTTTCTCGTTAGGTGATGCATGTTTTATTTACTAA Protein sequence : MKLSDFDYYLPEELIAQTPAEPRDSSRLMVLNRKEKTIEHRIFRDIVEYLKPGDLLVRNITKVIPARLYGVKETGARVEI LLLEKISEGVWEALVKPGSKVKKGTKIILSEGVEVICKDYSQQGARILEFNCSDDKLFELGNAPLPPYIKNQKVPFERYQ TVYSKETGSVAAPTAGLHFTEELLERLRNKGLEFADLILHVGLGTFRPVKVEDIREHKMHSERYYVPAETVKKIRETRKN KGRIIAVGTTSVRTLETIARLPNQESYHGKTDIFIYPPFEFKLTDAIITNFHLPKSTLLMLVAAFAGKDFILEAYNTAVK MKYRFFSLGDACFIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 4e-63 | 47 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 1e-62 | 46 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 3e-65 | 46 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 3e-65 | 46 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 5e-62 | 46 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 2e-62 | 46 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 1e-62 | 46 |
