|
Name : THA_238 (THA_238) Accession : YP_002334082.1 Strain : Thermosipho africanus TCF52B Genome accession: NC_011653 Putative virulence/resistance : Virulence Product : ClpC ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 233769 - 236228 bp Length : 2460 bp Strand : - Note : - DNA sequence : ATGTTTGACAAGTTTTCTGAAGAGTCCGCAGAAGTTTTTGTAATGGCTCAAGAAGAGGCAAAAGAGCTAGGACATTCATA TGTTGGTACAGAGCATCTACTTTTGGCTATTTTGAAAATTAATGATAATAAGATAAAGTCAATACTTGAAAATTATGGAA TTACTTATACAAAAATTAGAAATGAGGTAATTTCTATTGTAGGTATGGGAATGCGAGGATTTATAATGTCACCTCAGATG ACACCCAGAGCCAAAAGGGTAACGGAGTTAGCATATGAAGAAGCAAAGAGTCTTGGTGAAAATAAAATAAAGCCTATTCA TTTATTTTTAGGAATTTTAAGAGAAGGTGAAGGAATAGCAGTTCATATTTTAAGGAAAATGGGAATTGATGATCAGATGT TAAGAAGGGAGTTGTCAGGAGATATGCCTGAAGAGGATTTAGCTGATTTTACAGATTTTGATGAGGAAATAGTGACGCGT GCAAGACAATTGGAAGGTTTTGGAATTAATTTAACTGCACAAGCGATAAAAGGTGAACTTGACCCAGTTATTGGAAGAGA AAGTGAAATAGAACGTGTAATGCAAGTTTTAGTTAGGAGAAAGAAAAATAATCCAGTATTAATAGGTGATCCTGGTGTTG GTAAGTCTGCGATTGTTGAGGGGCTTGCTCAAAAAATTGTAAACGGTGAAGTTCCAGAACCTTTAAAAGGAAAGACTATT TTTTCATTGGATGTAGCTTCGCTTGTTGCTGGAACAAAGTACCGTGGCGAGTTTGAAAAAAGGATGAAAAAGCTACTTCA AGTATTAAAAAATCAAAAAGATATTATACTTTTCATTGATGAGATACATATGATTGTTGGTGCAGGTTCAGCTGAAGGAG CAGTTGATGCTGCAAATATTTTAAAACCAGCGCTTGCACGTGGAGAGATAAAATGTATAGGCGCTACAACACCTGATGAA TATAGAAAGTTTATTGAAAAAGATGCAGCATTAGAAAGAAGATTTCAAAAGATATATGTTCAAGAACCGACACCTGAGAT GACTATTAGAATTTTACAGGGTTTAAAACCAAAATATGAAAAACATCATAAAGTAAAATATACTGATGAAGCTTTAGAAG CAGCTGTATATTTGTCACAAAGATATATAAGTGATCATTTCTTGCCGGATAAAGCGATAGATGTGATAGATGAGGCTGGT GCAAGAGCAAGACTGAAAGCATTCGTTATGCCAAAGGAATTATTGAATTTTAAAGAAAAGATTGAAGATATAAAGTTGAA AAAAGAAATTGCTGCAGCAAATCAAGAATATGAAAAAGCAGCTAAATTAAAAGAAGAAGAGAATGAGTTAAAAGAGGAAT TTAATATTAGATACAATGAGTGGAAAAAGAATGTTGAAACTAGTGTTGTGGTTGTAGGTGTTGAAGAAATTGAAGAAGTA GTTTCAAATTGGACAGGTATTCCACTTAAGAAGCTTGAAGAAGGAGAAAGTGAAAAATTGTTGAAGCTTGAAGATGCTCT TCATAATAGGGTAGTTGGTCAGGAAGAAGCAGTGAGAGCTATTGCAAGATCCATTAGAAGAGCAAGGAGTGGTTTAAAAG ATCCTAGAAGACCTGTAGGTGTGTTTTTATTCCTTGGCCCAACTGGAGTTGGAAAAACTGAGCTTGCAAAGACACTTGCA GAGTACCTTTTTGGTGATGAAAAAGCACTTATTAGATTTGACATGAGCGAATATATGGAAAAATTCTCAGTTTCTAGATT GATTGGAGCGCCTCCAGGATATGTTGGATACGAAGAGGGTGGTGCTCTTACCGAAAGAGTAAGAAGGAGACCTTTCTCGG TAATTTTATTTGATGAAATTGAAAAGGCACATCCAGATGTCTTTAATCTTTTATTACAGATTATGGATGATGGAAGGTTA ACCGATTCTCAAGGCCATGTTGTTGACTTTAGAAATACAATCATAATAATGACGAGTAATATTGGTGGATCTCAAATTGT TTCTGGAAAAAGATCCTTAGGATTTGTGGATAGTAAAGATAGTAATATTGAATTTAAGGAAATGAAAGAAAAGGTTATTG AAGAAGTAAAGAAAACTTTTAGACCGGAATTTTTGAACAGAATAGATGAAGTAGTTGTATTCCATAAGCTTACAGAGAAT CATATTAGGGAAATAATAGAAATACTTTTAAAGGATATCAGAAAAAGACTTTCTGAGAAAGGTATTTTGCTTGAGTTGAG TAAAAGTGCAAAAGACTTTTTAGTACAAGAAGGTTACGATCCAGCATATGGGGCAAGGCCTTTAAAACGTGCAATTCAAA GGCATATAGAAGATCCTTTATCGGAAGAATTGTTGAAAGGTAAGTTTAAAGAGAATGACACAATTGTCTGTAGTTATGAA AATGGAAAGATAGTATTTAAAAAGAAAAGACAGAGAAAAGTAAAGGTGAAAAATGACTAA Protein sequence : MFDKFSEESAEVFVMAQEEAKELGHSYVGTEHLLLAILKINDNKIKSILENYGITYTKIRNEVISIVGMGMRGFIMSPQM TPRAKRVTELAYEEAKSLGENKIKPIHLFLGILREGEGIAVHILRKMGIDDQMLRRELSGDMPEEDLADFTDFDEEIVTR ARQLEGFGINLTAQAIKGELDPVIGRESEIERVMQVLVRRKKNNPVLIGDPGVGKSAIVEGLAQKIVNGEVPEPLKGKTI FSLDVASLVAGTKYRGEFEKRMKKLLQVLKNQKDIILFIDEIHMIVGAGSAEGAVDAANILKPALARGEIKCIGATTPDE YRKFIEKDAALERRFQKIYVQEPTPEMTIRILQGLKPKYEKHHKVKYTDEALEAAVYLSQRYISDHFLPDKAIDVIDEAG ARARLKAFVMPKELLNFKEKIEDIKLKKEIAAANQEYEKAAKLKEEENELKEEFNIRYNEWKKNVETSVVVVGVEEIEEV VSNWTGIPLKKLEEGESEKLLKLEDALHNRVVGQEEAVRAIARSIRRARSGLKDPRRPVGVFLFLGPTGVGKTELAKTLA EYLFGDEKALIRFDMSEYMEKFSVSRLIGAPPGYVGYEEGGALTERVRRRPFSVILFDEIEKAHPDVFNLLLQIMDDGRL TDSQGHVVDFRNTIIIMTSNIGGSQIVSGKRSLGFVDSKDSNIEFKEMKEKVIEEVKKTFRPEFLNRIDEVVVFHKLTEN HIREIIEILLKDIRKRLSEKGILLELSKSAKDFLVQEGYDPAYGARPLKRAIQRHIEDPLSEELLKGKFKENDTIVCSYE NGKIVFKKKRQRKVKVKND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-178 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| THA_238 | YP_002334082.1 | ClpC ATPase | VFG0079 | Protein | 0.0 | 54 |
