Gene Information

Name : THA_154 (THA_154)
Accession : YP_002334002.1
Strain : Thermosipho africanus TCF52B
Genome accession: NC_011653
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 150750 - 151628 bp
Length : 879 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACACAAAAGGGAACATGGATGGTAAAAGAAGGATTTGCTGAAATGTTTAAGGGTGGAGTAATAATGGATGTTACAAC
TGCAGAGCAAGCAAAAATAGCAGAAGAAGCTGGTGCAGTTGCAGTTATGGCACTTGAAAGGGTTCCGGCAGACATTAGAA
AAGCTGGTGGCGTTGCAAGAATGGCTAGCATTAGTAAAATTAAAGAGATTATGGAAGCAGTTTCTATCCCTGTAATGGCT
AAAGTTAGAATTGGTCATATTGCAGAAGCAAGAATATTAGAAGCTTTAGGAGTAGACTTTATTGATGAATCTGAAGTTTT
AACTCCAGCAGATGATAAGTATCATATAAACAAATGGGATTTTAAAGTTCCATTTGTTTGTGGAGCAAGGAACTTGGGAG
AAGCATTAAGAAGAATTGCTGAAGGTGCTGCAATGATAAGAACGAAGGGAGAAGCAGGTACAGGAAACGTTGTTGAAGCT
GTGAAGCATATGAGAACTGTAATGGATGAGATAAGAATGGTTCAAAATATGCCTGATGAAGAATTGGTCACTTTTGCAAA
AAATATTGGTGCTCCTGTAAATCTGGTAGCAAAAGTTAAAGAATTAGGAAGACTTCCTGTTGTTAATTTTGCCGCAGGTG
GTGTTGCAACTCCAGCAGATGCAGCATTAATGATGATGCTTGGTGCCGATGGAGTTTTTGTTGGAAGTGGAATATTCAAA
TCGAAAGATCCAGCAAAAATGGCAAAAGCAATTGTTATGGCTGTTACTTACTGGAATGATCCAGAAATGTTGTTAAAAAT
TTCTGAAGATATTGGGCAACCAATGGAAGGTTTAGAGATAGAAGAACTTGATGTAAAGCTCCAAGAGAGGGGTTGGTAA

Protein sequence :
MTQKGTWMVKEGFAEMFKGGVIMDVTTAEQAKIAEEAGAVAVMALERVPADIRKAGGVARMASISKIKEIMEAVSIPVMA
KVRIGHIAEARILEALGVDFIDESEVLTPADDKYHINKWDFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEA
VKHMRTVMDEIRMVQNMPDEELVTFAKNIGAPVNLVAKVKELGRLPVVNFAAGGVATPADAALMMMLGADGVFVGSGIFK
SKDPAKMAKAIVMAVTYWNDPEMLLKISEDIGQPMEGLEIEELDVKLQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-72 64
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-72 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-72 64