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Name : secA (THA_1422) Accession : YP_002335207.1 Strain : Thermosipho africanus TCF52B Genome accession: NC_011653 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 1437532 - 1440102 bp Length : 2571 bp Strand : - Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : GTGAAATTATTCGACAAAAATGAAAGGGTTATAAAAAAATATTGGAAAAAAGTAAATAAAATAAACAAGATAAACCTTGA AAGTAAAAATTTAACCGAATTAATTAATTCCTTGAAAACAATTAAAGAAAATATTACTCCTGAAAATATTGACGAATATA TTCCAGAAGTTTTTGCAATAGTAAGAGAAGTATCCAAACGAGTAATTGGATTAAGACCATTTGATGTACAACTTATAGGT GCAATGGTTCTCCATGAAGGGAAAGTTGCAGAAATGAAAACAGGTGAAGGAAAAACTCTAGTTGCAACTATGCCGGTTGT ATTAAATGCACTGCTTGGAAAAGGCGTTCACCTTGTAACTGTAAACGATTATCTTGCAAAAAGAGACGCTATGTGGATGG GACCTATATATCTTGCTTTGGGACTTAGAGTAGGTGTTATAAATACACAAAACAAGTCATATGAAGTTATTTGGAAAAAT GAGGAACTTGCAAAAAAGGCGTTAAATGAAAATTTGAGTGTTTGGCCTCAAGGTTTTAATGGAGAATTTCTTGAAGACGA AGCAAAAAATAAAGAAGCACTAGAAGCTTATCAGGTTGAATTGAAGGAAATCAGCAGAAAAGAAGCATATGAGTGTGATA TAACATACGGAACAAATACAGAGTTTGGGTTTGACTACTTAAGAGACAATCTTGTAATTGACCTGGAAGATAGAGTTCAA AGAGGACATTTTTATGCAATAGTGGACGAAGTAGATAGCATCCTTATAGACGAGGCAAGAACTCCTTTAATAATAAGTGG TCCATCAAAAACAAAAGCTTCAGATTATATTCGCTTCAATCAAATTGCTAAAAAACTCGTAAAAGACAAGCATTTTACTA TAGACGAGCAGAAAAAATCTGTAATATTAACAGACGAAGGTATAGAATATATAGAAAAACTTTTAAATATAGAAAATCTC TATGATCCTGAACACGTGAATAAAATGTATTTCTTATTAAATGCTTTAAAAGCACATTACCTGTTTAAAAAAGATGTAGA TTATATTATTCATAACGGTGAGATTGTAATAGTAGACGAATTCACAGGTAGACTTCTTCCAGGAAGAAGATACAGTGGAG GACTTCACCAAGCTATTGAAGCAAAAGAAGGAGTTAAAATCAAAGAAGAGTCGGTTACTTATGCAACTATAACATACCAG AATTACTTTAGAATGTATGAAAAACTTTCCGGTATGACAGGAACTGCTAAAACAGAGGAAGAAGAATTTAAACAAATATA CGGTATGGAAGTAGTTGTTATCCCAACTCACAAACCAATGATCAGAATAGATAGAGACGATTTAATTTACAGAACAGAAG ACGAAAAATTTGAGGCAGTAGTAAAAGAAATAAAAAAACGCTATGAAAAAGGGCAACCTGTTTTAGTAGGTACAACATCC ATTGAAAAAAGCGAAAGATTGAGTAAAATGCTAAGCAAAGAAAAAATACCTCACAACGTTTTAAATGCAAAACATCATGA AAAGGAAGCTCAAATCGTTGCATTAGCTGGTCAAAAAGGTTCAGTTACAATTGCAACTAATATGGCTGGTAGGGGGACAG ACATTAAATTAGGCCCCGGTGTAAAGGAATTAGGCGGGTTACTTATAATTGGAACTGAAAGACATGAAAGTAGAAGGATA GACAACCAACTTAGAGGTAGAGCTGGAAGACAAGGTGACCCAGGTGAATCTATATTCTTCTTGTCCTTAGAAGATGATAT TATAAGAATATTTGGTGGAGAAAAACTTGAAAAAATAATGAATCTAGTAAAAATTGAAAAAGGTGAGCCAATATATCATC CTATGCTTACAAAATTAATAGAAAGGGTCCAAAAAAAGGTTGAAAGTATAAATTTTGGAATAAGAAAAAATTTACTTCAA ATGGATACTGTTTTGGATACACAAAGACGAGCAATATATAGCTATAGAGAATATCTACTTTCAGGAAATATCGATGAACA CTTCAACGATGCAATAGATGATTTTATTGAAAGAAGGCTCGAAGAATTTTGTGAAAAAGGCGTTTGTAATGTAGAAGAAA TAAAAGAATCTTTAAAAATATTAAATATTAGCCTTGATAAACTGCCTGATACTAGAAATGAACTTAAAGAATATCTAAAA AATCTTTTAATGGAAAAATTTGAAAATAAAAAGAAAGAATTGGGAGAAGATTTCCCAAAAATTGGAAAGTTCATAGCATT GCGTGTAATAGATGAGAATTGGAGGCAGTACCTTGAAGAAGTTGAACACGTAAAAGAAGCAGTAAGCCTTAGAGCGTATG GACAAAAAGATCCAATCTTGGAATTTAAAAAGGAAACATTTAGAATGTTTGATGAGATGATGGCTAAAATATTTGAGCAA ACTATAATTTATACTTTAAACATTAGAAAAATCACTGATGAAGCCGAAAAAGAGTCAGAAAACGAGCTGAAAAAAATAAA TACCCAACACGATGAATTTACACTTGTAAACAGAAAAGAGAGAAGAGTTGCAGAAAAGAAAGGAAAAAAGAAATTAAAGG TCAAGAGGTGA Protein sequence : MKLFDKNERVIKKYWKKVNKINKINLESKNLTELINSLKTIKENITPENIDEYIPEVFAIVREVSKRVIGLRPFDVQLIG AMVLHEGKVAEMKTGEGKTLVATMPVVLNALLGKGVHLVTVNDYLAKRDAMWMGPIYLALGLRVGVINTQNKSYEVIWKN EELAKKALNENLSVWPQGFNGEFLEDEAKNKEALEAYQVELKEISRKEAYECDITYGTNTEFGFDYLRDNLVIDLEDRVQ RGHFYAIVDEVDSILIDEARTPLIISGPSKTKASDYIRFNQIAKKLVKDKHFTIDEQKKSVILTDEGIEYIEKLLNIENL YDPEHVNKMYFLLNALKAHYLFKKDVDYIIHNGEIVIVDEFTGRLLPGRRYSGGLHQAIEAKEGVKIKEESVTYATITYQ NYFRMYEKLSGMTGTAKTEEEEFKQIYGMEVVVIPTHKPMIRIDRDDLIYRTEDEKFEAVVKEIKKRYEKGQPVLVGTTS IEKSERLSKMLSKEKIPHNVLNAKHHEKEAQIVALAGQKGSVTIATNMAGRGTDIKLGPGVKELGGLLIIGTERHESRRI DNQLRGRAGRQGDPGESIFFLSLEDDIIRIFGGEKLEKIMNLVKIEKGEPIYHPMLTKLIERVQKKVESINFGIRKNLLQ MDTVLDTQRRAIYSYREYLLSGNIDEHFNDAIDDFIERRLEEFCEKGVCNVEEIKESLKILNISLDKLPDTRNELKEYLK NLLMEKFENKKKELGEDFPKIGKFIALRVIDENWRQYLEEVEHVKEAVSLRAYGQKDPILEFKKETFRMFDEMMAKIFEQ TIIYTLNIRKITDEAEKESENELKKINTQHDEFTLVNRKERRVAEKKGKKKLKVKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 2e-101 | 44 |
