Gene Information

Name : THA_134 (THA_134)
Accession : YP_002333983.1
Strain : Thermosipho africanus TCF52B
Genome accession: NC_011653
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 127471 - 128190 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence : 
ATGGGAAAGAGAAGGATCATGGTTATTGATGATCAGCCTGAGATATTAGAACTTATTAGCTTTACACTTGAAAAAGAAGG
ATATGAGGTTGTTCCTGTTGAAGATGCCGAAAAAGCTTTAGAAGAAATAAAAGACAAAGAAATTGATATGTTTTTAGTTG
ATATTATGTTACCTGGAATGGATGGATTTGAATTTGTCAGAAATATTAGAAGTCAAGAAAAATATAAATCTACACCTGTA
ATTTTTCTAAGTGCTAAAGGTGAAGAATTCGACAAAGTATTAGGCTTGGAACTTGGCGCAGATGATTATATAACTAAACC
ATTTAGTATAAGAGAATTACTTGCCCGTATAAAAGCAGTCTTCAGAAGAATGCAACTTTCCACTCAAGTTAAAGAAGAAA
AACCTAAAAAAATTGTTGCAAAAGATCTCGAAATAGATGTGGACAAATATGAAGTTAAAATTAAAGGTAAAAAAGTAAAC
CTTACTCCTCTTGAATTCGATCTTTTAAGATTTTTAGCTGAAAATGAGGGTAAAGTTTTCTCAAGAAATGTACTACTCGA
TAAATTATGGGGTTATGACTACTTTGGCGATACAAGAACAGTTGATGTACATATAAGAAGACTTAGAACAAAAATAGAAG
AAGATCCTTCTAATCCAAAATATATTGTAACTGTTAGAGGGAAAGGGTACAAGTTTAGAGATCCTGGAAAGGAAGAATAA

Protein sequence : 
MGKRRIMVIDDQPEILELISFTLEKEGYEVVPVEDAEKALEEIKDKEIDMFLVDIMLPGMDGFEFVRNIRSQEKYKSTPV
IFLSAKGEEFDKVLGLELGADDYITKPFSIRELLARIKAVFRRMQLSTQVKEEKPKKIVAKDLEIDVDKYEVKIKGKKVN
LTPLEFDLLRFLAENEGKVFSRNVLLDKLWGYDYFGDTRTVDVHIRRLRTKIEEDPSNPKYIVTVRGKGYKFRDPGKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-43 46
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-43 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THA_134 YP_002333983.1 DNA-binding response regulator NC_012469.1.7685629. Protein 1e-51 50
THA_134 YP_002333983.1 DNA-binding response regulator HE999704.1.gene2815. Protein 2e-49 50
THA_134 YP_002333983.1 DNA-binding response regulator AE016830.1.gene1681. Protein 2e-53 46
THA_134 YP_002333983.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 7e-44 45
THA_134 YP_002333983.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 6e-43 45
THA_134 YP_002333983.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 6e-43 45
THA_134 YP_002333983.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 3e-43 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 6e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 9e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 6e-48 44
THA_134 YP_002333983.1 DNA-binding response regulator NC_012469.1.7686381. Protein 2e-44 43
THA_134 YP_002333983.1 DNA-binding response regulator AM180355.1.gene1830. Protein 2e-38 43
THA_134 YP_002333983.1 DNA-binding response regulator AE015929.1.gene1106. Protein 6e-30 41
THA_134 YP_002333983.1 DNA-binding response regulator AF162694.1.orf4.gene Protein 2e-36 41
THA_134 YP_002333983.1 DNA-binding response regulator EU250284.1.orf4.gene Protein 3e-35 41
THA_134 YP_002333983.1 DNA-binding response regulator AE000516.2.gene3505. Protein 5e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THA_134 YP_002333983.1 DNA-binding response regulator VFG1702 Protein 2e-43 46
THA_134 YP_002333983.1 DNA-binding response regulator VFG1563 Protein 4e-43 45