Gene Information

Name : THA_1204 (THA_1204)
Accession : YP_002334992.1
Strain : Thermosipho africanus TCF52B
Genome accession: NC_011653
Putative virulence/resistance : Virulence
Product : pyk pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1226035 - 1227447 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGAGGAAAACAAGAATAGTAGCCACTATAGGACCGGCAACAGAATCTGAGGAAATGCTGGAAAAACTTGTAAATTCGGG
TGTAAACGTTTTTAGATTGAACTCATCTCATGATACCATTGAAATTCACAGAGAAAGAATTAGAAGACTAAAAAAAATCA
GAGAAAAATTAAACACACCATTTTCCATCCTTATTGACCTTTCTGGTCCAAAAATTAGAACAGGAAAGCTCAAGGAAGAA
TATATAACCCTAAAAGAAGGTTCTATATTAAAAATAACAACAGAAGATTTATTAGGTGACGAGAGTATATTATCTGTAAA
TTACAAAAGGTTTCCACTTGAAGTAAAAAGTGGTGACAGAATTTTATTAAATGACGGTGCAATAGAATTGACTGTTGAAA
AAGTTGAAGATAATATAGTATACACTAAAGTTATAAGAGGCGGAAAAATAACACACCATAGAGGTGTTAACCTTCCCGGA
GTTGACCTTTCAATTTCTGCTGTCACAGATAAAGACAAAAAATTTATTGACCTTGCCATTGAAGAAGATCTTGACTACAT
TGCTTTGTCATTTGTAAGAAAAGCTTCAGACGTAAAATACGCAAAGTCATTAAGCAATGGCATTCCAGTAATTGCAAAAA
TTGAAACTGCCCAAGCATTGGACAATCTTGAAGAAATAATTTCATTTGCTGATGGTGTTATGGTAGCAAGAGGTGATCTT
GGTGTAGAAATTCCACTATCCCAAGTTCCAATCGCTCAAAAAAGAATAATAGAAACAGCAAATAGAATGTCAAAACCTGT
TATAACTGCCACTCAAATGCTCGAATCAATGATCAATAATATGACTCCAACAAGGGCTGAAGTATCTGACATAGCAAATG
CTATACTAGATGGAACAGATGCTATTATGCTCTCTGCAGAAACTTCGATAGGAAAATATCCACTTAGAGCAGTAGCTGTA
ATGGATGAGGTAGCAAAAAATACTGAAAAATTTCTTTTAGATTACGACTCAATTGAACTAGAATGGATAAGAAATTACTA
TATATCAGAAAATATAGAAGATGCTATTTCACATGCGGTATATAACCTCTCAAGAGATATAAATGCAAAATTAATCATCA
CTGCAACTAGCACAGGAAAAACTGCAATAAATATTGCTCGCTTAAGACCTTCAGTTCCTATAATGGCTGCCACTCCAAAC
CTTTCGACCTATTATAGACTAAGTCTTGTGTGGGGAGTAATCCCTGTTATGATCAATCAAACACTTTCCACTGATGAAAT
GATTATAGAAGTAATGAGAAAAGCAAAAGAAACAAATCTTGCTAGCAAAGGCGACAAAGTAATTATAACCGCAGGAATTC
CTTGGGGAAGACCTGGAACAACAAATACACTCCAAGTTCATGAAATAATATAA

Protein sequence :
MRKTRIVATIGPATESEEMLEKLVNSGVNVFRLNSSHDTIEIHRERIRRLKKIREKLNTPFSILIDLSGPKIRTGKLKEE
YITLKEGSILKITTEDLLGDESILSVNYKRFPLEVKSGDRILLNDGAIELTVEKVEDNIVYTKVIRGGKITHHRGVNLPG
VDLSISAVTDKDKKFIDLAIEEDLDYIALSFVRKASDVKYAKSLSNGIPVIAKIETAQALDNLEEIISFADGVMVARGDL
GVEIPLSQVPIAQKRIIETANRMSKPVITATQMLESMINNMTPTRAEVSDIANAILDGTDAIMLSAETSIGKYPLRAVAV
MDEVAKNTEKFLLDYDSIELEWIRNYYISENIEDAISHAVYNLSRDINAKLIITATSTGKTAINIARLRPSVPIMAATPN
LSTYYRLSLVWGVIPVMINQTLSTDEMIIEVMRKAKETNLASKGDKVIITAGIPWGRPGTTNTLQVHEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-72 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THA_1204 YP_002334992.1 pyk pyruvate kinase VFG0479 Protein 7e-73 42