Gene Information

Name : fepD (E2348C_0492)
Accession : YP_002328064.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 552252 - 553256 bp
Length : 1005 bp
Strand : -
Note : with FepBCG is involved in the transport of ferric enterobactin

DNA sequence :
ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAG
CCTGCTCATTGGAGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAAGCCCTCTCCGGCACCTGCCAGAGCGCCGACTGCA
CCATCGTGCTCGACGCACGACTGCCGCGCACCCTTGCCGGTTTACTGGCAGGCGGTGCGCTTGGCCTTGCCGGGGCGTTA
ATGCAAACCCTCACCCGAAACCCACTTGCCGACCCCGGCTTACTTGGCGTGAATGCCGGAGCCAGCTTTGCCATTGTGCT
GGGTGCGGCGCTGTTTGGTTACTCATCCGCGCAGGAGCAACTGATGATGGCCTTCGCCGGCGCGCTGGTGGCGTCATTGA
TTGTTGCCTTTACCGGCAGCCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGGCTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAACTGCGTTTCTGGCAAGCCGGTTC
GCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTGCTTACCGCCGGAGCAACCGCGCTATTACTGA
GCCGCGCGCTGAACAGTTTAAGCCTTGGCAGTGACACCGCGACGGCGCTGGGCAGTCGCGTAGCGCGCACACAGTTGATT
GGTCTGCTGGCAATTACCGTGCTTTGTGGTAGTGCGACGGCGGTAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCC
GCACATGGCGCGCTGGCTGGTAGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTCGCTACCCCTGCCCTGCTGC
TGTTTGCCGATATCATTGGGCGGGTGATTGTTCCCGGCGAACTGCGCGTTTCTGTAGTCAGTGCCTTTATTGGTGCACCA
GTGCTGATCTTCCTCGTACGACGTAAAACGCGAGGTGGCGCATGA

Protein sequence :
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEALSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLMMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLTAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAP
VLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 6e-27 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 6e-27 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 6e-27 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 6e-27 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_002328064.1 iron-enterobactin transporter membrane protein VFG0926 Protein 2e-102 99