Gene Information

Name : espH (E2348C_3944)
Accession : YP_002331406.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : LEE-encoded effector EspH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4117259 - 4117765 bp
Length : 507 bp
Strand : -
Note : -

DNA sequence :
ATGTCGTCATCATTATCAGGTATAACATTCACTACTTCTTTGACAAGCCATGCGTCATGGAATAAGTTGACCCGAACTCT
TCATATATCGAATGATGATATAGTAGATGAACTGCAACTTAAAGCACGCATGCAGCAGCGTCACCACCGGGTTTTTGCAG
GCATTGATGACTATTCAATTATCAATTTTCGTGGAAAAGATTATGCTGTCCGCTTCATTAAAGATAAAGATAATTATGTG
TACAAAGTAAATAAGATAACTCAGGAAAGTGGATGTTTCTCAAGGATATTTAGCTTTTTGTATGGAGGCGTTACGAAGGC
CCTGGAAAGTAAATTAAATGAGAGACACATTACGCCACTGTCTTCAACCTGGTTTCCTCGCACTGCACTGGAAGGCTTTT
TAACTGAAAGAGGGCTCTCTTCTTTGTTACGTCGCGTACAGTCTACAGAAGGTGTGAACCCTCCAGAGAATACTACATTA
AACTCTTTATCAGGTGTGACAGTTTAA

Protein sequence :
MSSSLSGITFTTSLTSHASWNKLTRTLHISNDDIVDELQLKARMQQRHHRVFAGIDDYSIINFRGKDYAVRFIKDKDNYV
YKVNKITQESGCFSRIFSFLYGGVTKALESKLNERHITPLSSTWFPRTALEGFLTERGLSSLLRRVQSTEGVNPPENTTL
NSLSGVTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC38387.1 Orf18 Not tested LEE Protein 1e-74 100
espH YP_003236084.1 T3SS secreted effector EspH Virulence LEE Protein 9e-70 92
unnamed AAL06373.1 unknown Not tested LEE Protein 2e-60 78
unnamed CAI43870.1 hypothetical protein Not tested LEE Protein 1e-53 72
unnamed AAK26719.1 unknown Not tested LEE Protein 8e-55 72
unnamed AAL57546.1 unknown Not tested LEE Protein 8e-55 72
st28 CAC81866.1 ST28 protein Not tested LEE II Protein 8e-55 72
espH YP_003223471.1 T3SS effector EspH Virulence LEE Protein 2e-53 72
espH YP_003232157.1 T3SS effector EspH Virulence LEE Protein 1e-54 72
Z5115 NP_290264.1 hypothetical protein Not tested LEE Protein 2e-50 72
ECs4564 NP_312591.1 hypothetical protein Not tested LEE Protein 2e-50 72
unnamed AAC31509.1 L0030 Not tested LEE Protein 1e-50 72
unnamed ACU09454.1 hypothetical protein Not tested LEE Protein 1e-50 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espH YP_002331406.1 LEE-encoded effector EspH VFG0734 Protein 5e-75 100
espH YP_002331406.1 LEE-encoded effector EspH VFG0808 Protein 6e-51 72