Gene Information

Name : espB (E2348C_3934)
Accession : YP_002331396.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : translocon EspB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4104932 - 4105897 bp
Length : 966 bp
Strand : -
Note : -

DNA sequence : 
ATGAATACTATCGATAATAACAATGCGGCAATCGCAGTTAATTCTGTTTTGAGCAGCACGACTGACAGCACCAGTTCAAC
AACTACATCAACTTCGTCAATCAGTTCATCTTTACTTACTGATGGCAGAGTGGATATTTCTAAACTTCTGCTGGAGGTTC
AAAAACTGTTGCGTGAGATGGTCACCACATTGCAAGATTATCTTCAGAAGCAATTGGCGCAAAGCTATGACATCCAAAAA
GCCGTTTTTGAGAGCCAAAATAAAGCTATTGATGAGAAAAAAGCCGGTGCGACAGCCGCTCTGATTGGTGGTGCTATCTC
ATCTGTCCTGGGGATTTTAGGCTCTTTTGCTGCCATTAATAGCGCAACTAAAGGCGCGAGTGATGTCGCTCAGCAAGCCG
CTTCTACTTCTGCGAAGTCTATCGGTACAGTCTCTGAAGCTTCAACTAAAGCACTGGCGAAGGCTTCCGAAGGTATTGCA
GATGCAGCAGATGATGCAGCTGGCGCAATGCAGCAAACTATCGCGACAGCTGCAAAAGCGGCCAGTCGTACATCCGGTAT
CACTGATGATGTTGCTACTTCGGCTCAGAAAGCTTCTCAGGTAGCTGAAGAGGCTGCTGATGCTGCTCAAGAATTAGCAC
AGAAGGCAGGATTATTAAGTCGCTTTACTGCTGCTGCCGGAAGGATTTCCGGTTCAACGCCATTTATTGTTGTTACCAGC
CTTGCTGAAGGTACGAAAACATTGCCAACAACGATATCTGAATCTGTCAAGTCCAATCATGATATCAATGAGCAGCGTGC
TAAATCTGTAGAAAATCTTCAGGCGTCGAATTTAGATACCTACAAACAGGATGTTCGCAGAGCGCAGGATGATATCTCTA
GCCGTCTACGTGATATGACAACGACAGCCCGTGATCTTACTGACCTTATTAATCGCATGGGGCAAGCGGCTCGCTTAGCT
GGGTAA

Protein sequence : 
MNTIDNNNAAIAVNSVLSSTTDSTSSTTTSTSSISSSLLTDGRVDISKLLLEVQKLLREMVTTLQDYLQKQLAQSYDIQK
AVFESQNKAIDEKKAGATAALIGGAISSVLGILGSFAAINSATKGASDVAQQAASTSAKSIGTVSEASTKALAKASEGIA
DAADDAAGAMQQTIATAAKAASRTSGITDDVATSAQKASQVAEEAADAAQELAQKAGLLSRFTAAAGRISGSTPFIVVTS
LAEGTKTLPTTISESVKSNHDINEQRAKSVENLQASNLDTYKQDVRRAQDDISSRLRDMTTTARDLTDLINRMGQAARLA
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espB AAC38396.1 EspB Virulence LEE Protein 8e-103 100
espB YP_003236074.1 translocon EspB Virulence LEE Protein 6e-92 92
unnamed AAL06383.1 EspB Virulence LEE Protein 9e-93 86
espB AAL57556.1 EspB Virulence LEE Protein 1e-64 73
espB YP_003223461.1 translocon EspB Virulence LEE Protein 4e-65 73
espB CAI43860.1 EspB protein Virulence LEE Protein 2e-64 73
espB YP_003232167.1 translocator EspB Virulence LEE Protein 1e-64 73
espB AAK26729.1 EspB Virulence LEE Protein 1e-64 73
espB CAC81876.1 EspB protein Not tested LEE II Protein 1e-64 72
espB ACU09444.1 secreted protein EspB Virulence LEE Protein 6e-65 61
espB AAC31499.1 L0020 Virulence LEE Protein 3e-64 61
espB NP_290254.1 hypothetical protein Virulence LEE Protein 9e-65 61
ECs4554 NP_312581.1 protein EspB Virulence LEE Protein 9e-65 61
espB AFO66308.1 putative secreted protein EspB Not tested SESS LEE Protein 1e-51 47
espB AFO66387.1 putative secreted protein EspB Virulence SESS LEE Protein 1e-51 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espB YP_002331396.1 translocon EspB VFG0744 Protein 5e-103 100
espB YP_002331396.1 translocon EspB VFG0798 Protein 4e-65 61