Gene Information

Name : espF (E2348C_3930)
Accession : YP_002331392.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : LEE-encoded effector EspF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4103271 - 4103891 bp
Length : 621 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTAATGGAATTAGTAACGCTGCTTCTACACTAGGGCGGCAGCTTGTAGGTATCGCAAGTCGAGTGAGCTCTGCGGG
GGGAACTGGATTTTCTGTAGCCCCTCAGGCTGTTCGTCTTACTCCGGTGAGAGTTCATTCCCCCTTTTCTCCAGGTTCGT
CGAATGTTAATGCGAGGACGATTTTTAATGTGAGCAGCCAGGTGACTTCATTTACTCCCTCTCGTCCGGCACCGCCGCCA
CCGACAAGTGGACAGGCATCCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGATCATTTAGCTGCCTA
TGAACTATCGAAAGCGTCTGAGACTGTAAACTTTAAGCCAACCCGTCCGGCACCGCCGCCACCGACAAGTGGACAGGCAT
CCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGATCATTTAGCTGCCTATGAACTATCGAAAGCGTCT
GAGACTGTAAGCTTTAAGCCAACCCGTCAGGCACCACCGCCACCGACAAGTGGACAGGCATCCGGGCCTGGTGGACTACC
GCCCCTTGCACAGGCACTAAAAGATCATTTAGCTGCCTATGAGCAATCGAAGAAAGGGTAA

Protein sequence : 
MLNGISNAASTLGRQLVGIASRVSSAGGTGFSVAPQAVRLTPVRVHSPFSPGSSNVNARTIFNVSSQVTSFTPSRPAPPP
PTSGQASGASRPLPPIAQALKDHLAAYELSKASETVNFKPTRPAPPPPTSGQASGASRPLPPIAQALKDHLAAYELSKAS
ETVSFKPTRQAPPPPTSGQASGPGGLPPLAQALKDHLAAYEQSKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espF AAC38400.1 EspF Virulence LEE Protein 2e-68 100
unnamed AAC31495.1 L0016 Not tested LEE Protein 1e-58 88
unnamed ACU09440.1 LEE associated secreted protein EspF Virulence LEE Protein 1e-58 88
espF NP_290250.1 hypothetical protein Virulence LEE Protein 2e-58 88
ECs4550 NP_312577.1 protein EspF Virulence LEE Protein 2e-58 88
espF AAK26733.1 EspF Virulence LEE Protein 3e-35 83
espF AAL57560.1 EspF Virulence LEE Protein 3e-35 83
espF AAL60256.1 EspF Virulence LEE Protein 5e-43 77
espF CAC81880.1 EspF protein Virulence LEE II Protein 5e-43 77
espF YP_003232171.1 T3SS effector EspF Virulence LEE Protein 8e-43 77
espF YP_003236070.1 T3SS secreted effector EspF Virulence LEE Protein 1e-51 74
unnamed AAC28567.1 unknown protein Not tested LEE Protein 3e-31 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espF YP_002331392.1 LEE-encoded effector EspF VFG0748 Protein 8e-69 100
espF YP_002331392.1 LEE-encoded effector EspF VFG0794 Protein 5e-59 88