Gene Information

Name : lpfB (E2348C_3797)
Accession : YP_002331263.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : fimbrial chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3963241 - 3963894 bp
Length : 654 bp
Strand : -
Note : -

DNA sequence : 
GTGTTAATTTCGCAGTCTGCACTAGCGAGTGGGGTTGGGCTTAGTTCTACTCGGGTGATTTATGACGGTAATAAGAAAGA
AGCATCGCTAACCGTACAAAACAAAAATAAATCAGAAGAATTTCTTATTCAGTCATGGGTTGATGATGCAACGGGTAGTA
AAAAAACACCATTCATCATTACTCCGCCATTATTCAAACTTGAGCCAGGAAAAAACAACATCTTACGTATCGTAAATGTG
AATCCGTCCTTACCTCAGGATCGTGAATCTGTTTACTGGGTAAACGTCAAAGCGATTCCTTCTCAAAATGAAGAAAATGA
AGGGAAAAATGTCTTGCAGATTGCAGTTCGTACTCGCATCAAGCTTTTTTATCGTCCAGCAGGTCTAAAAGGGGATATTA
AATCTTCGCCAGGAGAACTACGTTTTACGCGAAACGGTAAACAGATAAAAGTTGACAATCCAACTGTTTTTAACATCACG
TTCAGTGATGTATTTATTAACGGACACGAAATTGAAAAGTCCGGTATGGTGCCAGCTAAAGGGGCTTTGAATATCTATTT
GCCTGCAGGTGTGAACAGTGCTTCGCAAATAAAATATAATACAATTAATGATTTTGGCTCTTCAGGTGAATATCTGACTC
GCGAAATTAATTAA

Protein sequence : 
MLISQSALASGVGLSSTRVIYDGNKKEASLTVQNKNKSEEFLIQSWVDDATGSKKTPFIITPPLFKLEPGKNNILRIVNV
NPSLPQDRESVYWVNVKAIPSQNEENEGKNVLQIAVRTRIKLFYRPAGLKGDIKSSPGELRFTRNGKQIKVDNPTVFNIT
FSDVFINGHEIEKSGMVPAKGALNIYLPAGVNSASQIKYNTINDFGSSGEYLTREIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-40 43
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-39 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpfB YP_002331263.1 fimbrial chaperone VFG0455 Protein 8e-73 67
lpfB YP_002331263.1 fimbrial chaperone VFG0911 Protein 1e-39 43
lpfB YP_002331263.1 fimbrial chaperone VFG1644 Protein 2e-39 43
lpfB YP_002331263.1 fimbrial chaperone VFG0875 Protein 2e-39 42
lpfB YP_002331263.1 fimbrial chaperone VFG0445 Protein 2e-42 41