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Name : lpfC (E2348C_3796) Accession : YP_002331262.1 Strain : Escherichia coli E2348/69 Genome accession: NC_011601 Putative virulence/resistance : Virulence Product : fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3960638 - 3963217 bp Length : 2580 bp Strand : - Note : - DNA sequence : ATGTCATGGATGGTCGTTTCGCGCACTTACACTTCTTTTTTTCCCTTTTCTTTATCTGTATTGGCGCTTACGGTTGCAGG CTCTTTTTCTGCGACAGCTGGAAAATTTAATCCGCGTTTTCTGGAAGATACCGCAGGGATCAACCAGCATGTTGACCTTT CCATGTACGAAACTGACCATGGCGCGCAGTTGCCTGGAACATATCGCGTTTCTTTAATCGTCAATGAACAAAAAATGGAA ACGCGCACTCTGGAGTTTAAGGCGGCTACAGAATCCCAACGAAAGGAGATGGGGGAGTTTCTCATACCTTGTTTAAGCCG GACACAACTGGCCGATATGGGCGTTCGTGTAGACAGTTTTTCAGCACTTAACCTTATACCAGCAGAAGCCTGTGTGGCGT TTAATGAAATTATCCCTCAGGCGACCAGTCATTTTGATTTTAGCGAACAAAAACTGGTGATGAGTTTTCCTCAGGCGGCA ATGCAGCAGGTTGCTCGCGGTACAGTACCTGAATCTCGCTGGGACGATGGTGTGCCCGCGTTGCTTCTTGATTACAGTTT CAGCGGTAGTAACAGTTCTCATGATACAAAAAGTTATAATCGCTACATTGATGAAAATGGTAATCATCACCAGGATAAAA ACGAAACTAGCCAGACTAACGATAGCTACTACTTAAGTATGCGAAGCGGCCTTAACCTTGGGGCATGGCGTCTGCGAAAT TACAGTAACTGGAGCTATAGTAACGGCGAGAAGCAGTGGGACAATATTGGCACCTATGTAACACGGGCCATTGTTCCGCT GAAAGCGCAACTGACATTGGGTGATACAGCAACACCTTCAGATATTTTTGACAGTGTGCAGATGCGCGGGGCATTACTGG CCTCTGATGAAGAAATGTTGCCAGACAGCCAACGTGGTTTTGCTCCGGTAGTTCGAGGGATAGCGAAAAGTAACGCGGAA GTCAGTATTGAACAAAATGGTTACGTGATTTATCGAGCATTTGTCCAGCCAGGTGCGTTTGAAATTAACGATTTATACCC CACAGCGAACAGCGGTGATTTAACCGTAATTGTTAAAGAGGCTGATGGTAGTGAACAAAGATTTATTCAGCCATTCTCTT CAGTCGCTGTTTTCCAACGTGAAGGGCATCTCAAATATAGCCTTTCTGCTGGTGAATACCGTGCTGGTAATTACGATAGC GCCAACCCACGCTTTGGTCAGTTTAATGCGATGTATGGTTTACCGTTTGGTATGACCACCTATGGTGGCGCATTAATTTC TAAGGATTACAATGCATTTGCTCTGGGATTGGGAAAAAACTTTGGCTCTATTGGTGCAATATCGGTTGATATTACTCAGG CAAAAAGTACATTAAATAATAATGCAACCGATCAGGGACAATCGTACCGCTTTCTTTATTCAAAAAGCTTTGCCAGCGGC ACAGATTTCCGTTTATTGGGTTACAAGTATTCTACCAGTGGTTTTTATACCTTCCAGGAAGCAACAGATGTGCGTAGCGG TGCTGACAGCGATTACGGCCGTTACCATAAGCGTAGTGAAATTCAGGGTAATTTGACACAGCAATTGGGCACCTATGGGT CGGTTTATTTCAATATGACCCAGCAGGATTACTGGAATGATGACGGTAAGCGCCTTTCTTTGGCTACCGGGTACAACGGC CGTATTGGACGTGTTAATTACAGTATTGCTTACAGTTGGAATAAAAGCCCTGAATGGGATGAAAACGACCAGTTATGGTC ATTTAATATTTCTATTCCGTTTGGTCGGGCATGGAGCAACTACCGCGTGACAACCGATCAGGATGGCCGCACGATACAAC AGCTCGGCGTCAATGGCACTCTGTTAGAAGATCGCAATCTTAGCTATAACGTTCAGGAAGGGTATTCCAGTAATGGTGTT GGTAATAGCGGTAATGCCAGTTTGGCGTACCAGGGCGGCGCCGGTAATATCAGCGTGGGTTACAGCTATGGTAAAGACTA CCAGCAGACTAACTACAGCCTGCGTGGTGGCATTGTAGCGCACAGTGAAGGGATCTCGCTTTCCCAACCTTTGGGTGAAA CAATTGCTATAGTTTCAGCACCAGGTGCCCGGGGGGCGAAAGTATTAAATAATAGTGGTGTGAGTGTTGACTGGCAAGGT AATGCGGTCGTTCCTTATCTGAGTATTTACCGTGAAAATGATGTGTCCATTCGCAGTGAAACGTTGAATGACAGTGTTGA TATGAACAGCGCATTCCAGACAATTGTGCCAACTCGAGGAGCTGTCGTACGGGCGCATTTCGATACCCGTGTGGGTTATC GAGTTCTTATGACATTAATTCGGCAAAATGGAGTGAGCGTCCCCTTTGGTGCAACTGCAACGCTGGTTTCAGATACAACT GAACAGATTAGCGGTATTGTTGGTGAAGATGGTCAGTTATATATCAGTGGGATGCCTAAAACAGGGAATGTGAAGATCGT ATGGGGTAAAGATACGTCACAACAATGCGTTGCGAAATATGAACTACCGGTTGAGGAAAAAAATTCCGGTATTATTTCCG TGACAGCAAATTGTCAATAA Protein sequence : MSWMVVSRTYTSFFPFSLSVLALTVAGSFSATAGKFNPRFLEDTAGINQHVDLSMYETDHGAQLPGTYRVSLIVNEQKME TRTLEFKAATESQRKEMGEFLIPCLSRTQLADMGVRVDSFSALNLIPAEACVAFNEIIPQATSHFDFSEQKLVMSFPQAA MQQVARGTVPESRWDDGVPALLLDYSFSGSNSSHDTKSYNRYIDENGNHHQDKNETSQTNDSYYLSMRSGLNLGAWRLRN YSNWSYSNGEKQWDNIGTYVTRAIVPLKAQLTLGDTATPSDIFDSVQMRGALLASDEEMLPDSQRGFAPVVRGIAKSNAE VSIEQNGYVIYRAFVQPGAFEINDLYPTANSGDLTVIVKEADGSEQRFIQPFSSVAVFQREGHLKYSLSAGEYRAGNYDS ANPRFGQFNAMYGLPFGMTTYGGALISKDYNAFALGLGKNFGSIGAISVDITQAKSTLNNNATDQGQSYRFLYSKSFASG TDFRLLGYKYSTSGFYTFQEATDVRSGADSDYGRYHKRSEIQGNLTQQLGTYGSVYFNMTQQDYWNDDGKRLSLATGYNG RIGRVNYSIAYSWNKSPEWDENDQLWSFNISIPFGRAWSNYRVTTDQDGRTIQQLGVNGTLLEDRNLSYNVQEGYSSNGV GNSGNASLAYQGGAGNISVGYSYGKDYQQTNYSLRGGIVAHSEGISLSQPLGETIAIVSAPGARGAKVLNNSGVSVDWQG NAVVPYLSIYRENDVSIRSETLNDSVDMNSAFQTIVPTRGAVVRAHFDTRVGYRVLMTLIRQNGVSVPFGATATLVSDTT EQISGIVGEDGQLYISGMPKTGNVKIVWGKDTSQQCVAKYELPVEEKNSGIISVTANCQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 5e-164 | 43 |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 4e-164 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lpfC | YP_002331262.1 | fimbrial usher protein | VFG0454 | Protein | 0.0 | 71 |
| lpfC | YP_002331262.1 | fimbrial usher protein | VFG0876 | Protein | 1e-168 | 44 |
| lpfC | YP_002331262.1 | fimbrial usher protein | VFG1645 | Protein | 3e-164 | 43 |
| lpfC | YP_002331262.1 | fimbrial usher protein | VFG0912 | Protein | 5e-164 | 43 |
| lpfC | YP_002331262.1 | fimbrial usher protein | VFG0446 | Protein | 3e-155 | 41 |
