|
Name : yghJ (E2348C_3253) Accession : YP_002330723.1 Strain : Escherichia coli E2348/69 Genome accession: NC_011601 Putative virulence/resistance : Virulence Product : inner membrane lipoprotein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0810 EC number : - Position : 3380138 - 3384712 bp Length : 4575 bp Strand : - Note : - DNA sequence : ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGG TGGTTCCGGACCTTCCTCCGACACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC CAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAACCTACGCCGGATCCGACACCTGATCCAGAGCCAACACCA GAACCGGAGCCAGAACCTGTTCCTACGAAAACCGGTTATCTGACCCTGGGCGGAAGCCAGCGGATAACTGGTGCTACTTG TAATGGTGAATCCAGCGATGGCTTTACCTTTACGCCAGGCGACAAAGTCACCTGTGTGGCAGGGAACAACACGACAATTG CTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGTCTTGAGGACGCGCAA GAACTGGCGGCTTCCGATGACAAGAAAAGCAATGCGGTTTCGCTGGTAACGTCCAGTAACAGCTGTCCGGCGGATACAGA ACAGGTTTGCCTGACGTTCTCCTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATCGATCTGGCACCGG AAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCGCCATCCACTCATACTTCACCG GTCGTGCCCGTCACCACTCCGGGAACAAAACCGGATCTGAACGCTTCCTTCGTGTCGGCTAACGCGGAACAGTTTTATCA GTATCAACCTACGGAAATCATTCTCTCTGAAGGCCGACTGGTAGATAGCCAGGGATATGGTGTTGCTGGCGTCAACTACT ACACCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCCTTTAGCTGGGGCGAAACCATCTCCTTTGGTATC GATACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCATTGACTGAACTGGGTGATGAAGTTCGCGGGGC GAATATCGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAATACCCGTGTTGTTCCGGACGATGTACGCAAGG TCTTTGCCGAATATCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAATGGTGCGACGCTGGATGAAGGCGAT CAAAACGTTGTGTTGCCTAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCAAAGAGATCGATACCGCGATTTGTGC GAAAACCGACGGTTGCAACGAGGCTCGCTGGTTCTCGCTGACAACGCGCAATGTTAATGACGGCCAGATTCAGGGCGTTA TCAACAAGCTGTGGGGTGTGGATAAAGATTACAAATCAGTGACGAAATTCCACGTCTTCCATGACTCCACCAACTTCTAT GGCAGTACCGGTAACGCGCGCGGTCAGGCGGTGGTAAATATCTCCAACGCGGCATTCCCGATTCTGATGGCGCGTAATGA TAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAATGAGCTGGCGTACATTACGGAAGCGCCTTCCA TTGTGCAGCCAGAGAACGTTACGCGCGATACCGCCACCTTCAACCTGCCGTTTATTTCGCTGGGGCAAGTCGGTGAGGGC AAACTGATGGTTATCGGTAACCCGCACTACAACAGCATTTTGCGTTGTCCGAACGGTTACAGCTGGAACGGGGGCGTTAA TAAAGACGGGCAGTGTACGCTCAGCGGTGATTCAGATGACATGAAGCACTTCATGCAGAACGTACTGCGCTATCTGTCCG ACGATAAATGGACGCCGGACGCGAAAGCCAGCATGACCGTAGGCACCAACCTGGATACTGTCTATTTCAAACGTCATGGT CAGGTTACAGGAAACAGCGCTGAGTTCGGCTTTCATCCGGATTTTGCGGGTATCTCTGTTGAGCATTTAAGTAGCTATGG CGATCTCGACCCGCAGGAAATGCCGCTGCTGATCCTCAACGGCTTTGAGTATGTGACTCAGGTTGGTAACGATCCTTATG CAATCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACTCAGCAGGATGTGACCGATCTGATCGCCTATCTGAACAAA GGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAACCTTAAGGAAGAGAGTGCGTCTGGCTTTGTGCGTCTGTTGGA TGCCGCGGGTCTGTCAATGGCGCTGAACAAGTCCGTGGTGAATACCGATCCGCAGGGGTACCCAAACCGCGTTCGCCAGC AACGTGAAAAAGGTATCTGGGTTTATGAACGCTATCCTGCCGTAGATAGTGCTCAGCCGCCATATACCATCGATCCCGAT ACCGGGAAGGTGACCTGGAAATATCAGGAAGAAGGCAAGCCTGATGATAAACCGAAACTGGAAGTTGCTAGCTGGCAGGA AGACGTTGATGGTAAGCAGGTAACGCGTTATGCCTTTATTGATGAGGCAGAGCATTCAACAGAAGAATCTCTGGAAGCGG CAAAGGCAAAAATCTTTGAGAAGTTTCCTGGGTTACAGGAGTGTAAGGACTCGACTTACCATTACGAGATTAACTGTTTG GAGCGCCGCCCAGGCACGGATGTTCCGGTAACAGGTGGCATGTATGTTCCGCGCTATACGCAACTGAATCTTGACGCCGA CACGGCAAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTCTACTTCCGGA CCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGTTGTGGAAT AAAATTGAATATCGCTATGAAAACGACAAGGATGACGAGCTGGGCTTTAAAACGTTCACTGAGTTCCTGAATTGCTACGC CAACAATGCCTATAGCGAAGGCACGCAGTGTTCTGCAGATCTGAAAAAATCGCTTGTCGATAACAACATGATCTACGGTG ACGGTAGCAGCAAAGCAGGCATGATGAACCCGAGCTATCCGCTCAACTATATGGAAAAACCGCTGACGCGCCTGATGCTG GGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTCGAGAAGTATCCGGGAGCGGTATCGGCAGAAGGTGAGAAGGT TACTGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCGGGTAACATGCAGTCTACTGGCCTGTGGGCTCCGG CTCAGCAAGAGGTCACCATTGAGTCTACTGCATCAGTTCCTGTGACTGTCACCGTGGCGCTGGCCGACGATCTGACCGGA CGCGAGAAGCATGAAGTCGCGCTGAACCGTCCGCCAAAAGTGACGAAAACCTATGATCTGAAAGCCAATGATAAGGTGAC CTTCAAGGTGCCTTACGGTGGTCTGATTTATATCAAGGGCAACAGCCCAAAGAATGAGTCAGCCGAATTCACCTTTACTG GTGTGGTAAAAGCGCCGTTCTATAAAGACGGCGAATGGAAAAACGCTCTGAACTCCCCTGCGCCGTTGGGTGAGCTGGAG TCAGATTCTTTCGTCTACACTGCACCGAAGAACAACCTGAACGCCAGCAATTACAGTAATTACACTGACGGCGTAGCAGA ATTCGCTAAAGAACTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTGATGGCGAAAGTGGTAACCACCGGA TGTTTACCTATAAGGCATTGACAGGTCACAAGCATCGTTTCGCCAACGATGTGCAGATCTCCATCGGTGATGCGCACTCG GGTTATCCGGTAATGAACAGCAGCTTCTCGACGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGTTGATCTG GCACGAAGTCGGTCATAACGCTGCAGAAACACCGCTGAACGTACCGGGTGCAACTGAAGTGGCGAACAACGTGCTGGCGC TGTACATGCAGGATCGCTATCTCGGTAAGATGAACCGTGTCGCTGACGACATTACCGTCGCGCCGGAATATCTGGACGAG AGCAACGGTCAGGCCTGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGTTGAAGGAGTGGGCAGAGGA AAACTTTGATATCAAACAGTGGTATCCAGATGGTGAGCTGCCTAAGTTCTACAGCGATCGTAAAGGGATGAAGGGCTGGA ACCTGTTCCAGTTGATGCACCGTAAAGCGCGCGGCGATGATGTCAGCAATGACAAGTTTGGCGGCAGAAATTACTGTGCT GAGTCAAACGGTAACGCAGCGGACACGCTGATGCTGTGTGCATCCTGGGTCGCTCAGGCGGATCTTTCGGAATTCTTTAA GAAATGGAATCCGGGCGCAAATGCTTACCAGCTTCCGGGGGCAAGTGAGATGAGCTTCGAAGGCGGAGTGAGCCAGTCGG CTTACAACACGCTCGCGGCGATGCACCTGTCGAAACCGGAAAAAGGGCCGGAAACCATTAATAAGGTTACCGAGTATTCG ATGCCAGCCGAATAA Protein sequence : MNKKFKYKKSLLAAILSATLLAGCDGGGSGPSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPDPTPDPEPTP EPEPEPVPTKTGYLTLGGSQRITGATCNGESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQ ELAASDDKKSNAVSLVTSSNSCPADTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSP VVPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGI DTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGD QNVVLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDKDYKSVTKFHVFHDSTNFY GSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVQPENVTRDTATFNLPFISLGQVGEG KLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLSGDSDDMKHFMQNVLRYLSDDKWTPDAKASMTVGTNLDTVYFKRHG QVTGNSAEFGFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLNK GGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNTDPQGYPNRVRQQREKGIWVYERYPAVDSAQPPYTIDPD TGKVTWKYQEEGKPDDKPKLEVASWQEDVDGKQVTRYAFIDEAEHSTEESLEAAKAKIFEKFPGLQECKDSTYHYEINCL ERRPGTDVPVTGGMYVPRYTQLNLDADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWN KIEYRYENDKDDELGFKTFTEFLNCYANNAYSEGTQCSADLKKSLVDNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLML GRSWWDLNIKVDVEKYPGAVSAEGEKVTETISLYSNPTKWFAGNMQSTGLWAPAQQEVTIESTASVPVTVTVALADDLTG REKHEVALNRPPKVTKTYDLKANDKVTFKVPYGGLIYIKGNSPKNESAEFTFTGVVKAPFYKDGEWKNALNSPAPLGELE SDSFVYTAPKNNLNASNYSNYTDGVAEFAKELDTFASSMNDFYGRDGESGNHRMFTYKALTGHKHRFANDVQISIGDAHS GYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLNVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLDE SNGQAWARGGAGDRLLMYAQLKEWAEENFDIKQWYPDGELPKFYSDRKGMKGWNLFQLMHRKARGDDVSNDKFGGRNYCA ESNGNAADTLMLCASWVAQADLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLAAMHLSKPEKGPETINKVTEYS MPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 91 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_002330723.1 | inner membrane lipoprotein | VFG0106 | Protein | 0.0 | 49 |
