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Name : gspE (E2348C_3248) Accession : YP_002330718.1 Strain : Escherichia coli E2348/69 Genome accession: NC_011601 Putative virulence/resistance : Virulence Product : type II secretion protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3374098 - 3375591 bp Length : 1494 bp Strand : - Note : - DNA sequence : ATGGTGCCTGTAGCACAGGAAACCACCGCTAACACCGTGCGTCTGCCCTACAGTTTCAGCCGTCGGTTTAGCCTGGTGGC ATGGTGCGAAGCGTCGCTGGAGATCCTCCACGTCCACCCGTTGTCGCTCTCTGTCTTGCAGGAGTTGCAGCGGGGGCTGA ACGCGCCCTTTACGCTGCGGCAAATCGACGAGGCCGAATTTGAACAGCGGCTGAATGCGGTCTGGCAGCGGGACTCTTCC GAGGCCCGCCAGCTGATGGAAGATCTCGGTTCTGCCGAGGACTTTTTTACTCTCGCAGAAGAACTACCGGAAACGGAAGA TCTGCTGGAAAGTGACGACGATGCGCCAATCATCAAACTGATCAACGCCATGTTGGCAGAGGCGATTAAAGAAGGCGCTT CGGATATCCACATCGAGACGTTTGAAAAGAGTCTGGTGATCCGTTTTCGTGTTGACGGCACACTACATGAAATGCTGCGC CCGGGGCGCAAACTGGCCTCGCTGCTGGTATCGCGTATCAAGGTGATGGCGCGGCTGGATATTGCCGAAAAGCGCGTACC GCAGGATGGGCGTATTGCGCTGCTGCTGGGCGGTCGGGCGATTGACGTGCGTGTCTCCACCATGCCCTCCGCCTGGGGCG AGCGCGTGGTGCTGCGACTGCTGGACAAAAACCAGGCTCGCCTGACGCTGGAGCGTCTGGGTTTAAGTCTCGAACTGACT GCGCAGTTGCGCCAGCTGTTACACAAACCGCACGGCATTTTTCTGGTGACGGGGCCGACCGGTTCCGGCAAAAGCACCAC GCTGTATGCTGGATTGCAGGAGCTGAACAACCACTCGTGTAACATTCTCACGGTTGAAGACCCTATCGAATACATGATTG AAGGGATCGGTCAGACGCAGGTTAACACCCGCGTCGGCATGACCTTCGCCCGTGGCCTGCGCGCGATTTTGCGTCAGGAC CCGGATGTGGTGATGGTCGGTGAAATCCGCGATACCGAAACCGCAGAAATTGCCGTCCAGGCATCGCTTACAGGGCACCT GGTCCTTTCCACGCTGCATACCAACACGGCGGTGGGGGCGATCACGCGTTTGCAGGATATGGGCGTGGAGCCTTTCCTGC TCTCTTCCAGTTTGACGGGCGTGATGGCGCAGCGACTGGTTCGCACGCTGTGTCCCGACTGCTGCCAGTCCGCGCCTGCC ACTGACGAAGAAAAACGCCTGCTGGGGATTACCGATGCGCATGCCGTCACGCTGTACCATCCGCAGGGCTGCCCCGCCTG TAATCACAAAGGTTTTCGCGGACGTACTGCCATCCATGAACTGATTGTGGTGGACGCCACATTGCGTGATTTGATCCACC GTCAGGCCGGGGAACTGGAGCTGGAACGTTATGTCCGGCAACACTCCGCAGGTATCCGCAGTAACGGCATTGAGAAAGTG CTCGCCGGAGAAACCTCTCTCGATGAAGTTCTGCGGGTAACCATGGAGGCGTAA Protein sequence : MVPVAQETTANTVRLPYSFSRRFSLVAWCEASLEILHVHPLSLSVLQELQRGLNAPFTLRQIDEAEFEQRLNAVWQRDSS EARQLMEDLGSAEDFFTLAEELPETEDLLESDDDAPIIKLINAMLAEAIKEGASDIHIETFEKSLVIRFRVDGTLHEMLR PGRKLASLLVSRIKVMARLDIAEKRVPQDGRIALLLGGRAIDVRVSTMPSAWGERVVLRLLDKNQARLTLERLGLSLELT AQLRQLLHKPHGIFLVTGPTGSGKSTTLYAGLQELNNHSCNILTVEDPIEYMIEGIGQTQVNTRVGMTFARGLRAILRQD PDVVMVGEIRDTETAEIAVQASLTGHLVLSTLHTNTAVGAITRLQDMGVEPFLLSSSLTGVMAQRLVRTLCPDCCQSAPA TDEEKRLLGITDAHAVTLYHPQGCPACNHKGFRGRTAIHELIVVDATLRDLIHRQAGELELERYVRQHSAGIRSNGIEKV LAGETSLDEVLRVTMEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 0.0 | 99 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002330718.1 | type II secretion protein | VFG2048 | Protein | 0.0 | 97 |
| gspE | YP_002330718.1 | type II secretion protein | VFG0182 | Protein | 6e-133 | 62 |
| gspE | YP_002330718.1 | type II secretion protein | VFG1876 | Protein | 4e-127 | 56 |
| gspE | YP_002330718.1 | type II secretion protein | VFG2426 | Protein | 4e-72 | 49 |
| gspE | YP_002330718.1 | type II secretion protein | VFG0112 | Protein | 9e-80 | 46 |
| gspE | YP_002330718.1 | type II secretion protein | VFG1880 | Protein | 5e-76 | 44 |
