Gene Information

Name : gspI (E2348C_3244)
Accession : YP_002330714.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : type II secretion protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3371468 - 3371839 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGCGTGGATTTACCTTGCTGGAAGTAATACTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCAAATCCTTGAGGAGAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACTGCGC
TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG
CGAACGATCCCTCTGAATACCGGTAACGTGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGACGACTTTTCGCC
AGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence : 
MKRGFTLLEVILALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTIPLNTGNVLLQAVDIEVSLHDDFSPVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 2e-40 98
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-38 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI YP_002330714.1 type II secretion protein VFG2052 Protein 2e-38 92