Gene Information

Name : gspJ (E2348C_3243)
Accession : YP_002330713.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : type II secretion protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4795
EC number : -
Position : 3370866 - 3371471 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence :
GTGAGAAGGGCTCGCGCTGGTTTCACATTACTGGAAATGCTGGTGGCGATAGCCATTTTTGCCTCACTGGCACTGATGGC
GCAGCAGGTGACAAACGGCGTTACACGCGTGAATAGCGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAA
CGATGAGTTTTTTGAACCACGATCTGACACAAATGATGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCG
TTACTGGCGGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGAATACGCTTTGTGCGCGGCGGCGTGGTCAATCCGTTGAT
GCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTACCGCATTCATGGTGGTTATCTCGAACGGTTAGCCTGGCCACTGA
CTGATGCGGCAGGCAGCGTGAAGCCAACAACGCAAAAATTAATCCCGGCGGATTCGCTCCGTTTGCAGTTCCACGACGGC
ACGTGCTGGCAGGAGAGCTGGTCATCAGTGCAGGCGATTCCTGTGGCAGTACGCATAACCCTGCATTCGCCGCAATGGGG
CGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATCATGA

Protein sequence :
MRRARAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLNHDLTQMMPRPVRGDQGQREPA
LLAGAGVLASESEGIRFVRGGVVNPLMRLPRSNLLTVGYRIHGGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFHDG
TCWQESWSSVQAIPVAVRITLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-83 98
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 1e-87 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_002330713.1 type II secretion protein VFG2053 Protein 7e-82 96