Gene Information

Name : gspL (E2348C_3241)
Accession : YP_002330711.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : GspL-like protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3297
EC number : -
Position : 3368717 - 3369886 bp
Length : 1170 bp
Strand : -
Note : similar to general secretory pathway protein L

DNA sequence :
ATGCTTGAGATTTTTTTCCCGCTTTGCGCCGCTGATCCCATCCGTTGGCAGCGCCATACACCCGACGTGGAGCACGGTAT
CTGGCCTGACGTTGCTGACGAACGTCTCCAGCAATGGCTGCAAACTGATGCGATTCGACTCTACATTCCCGGCGAATGGA
TCAGCGTCTGGCAGGTTGAACTGCCTGATGTGCCCCGCAAGCAGATACCGACGATTCTGCCCGCCTTGCTGGAAGAAGAG
CTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAAAATCGACCAGCAACTGGCAACCGTAGCTGTGATTCACCA
GCAGCATATGCGCAACATTGCGCAGTGGTTGCAGGCAAACGGCATCACCCGCGCTACTGTCGCGCCGGACTGGATGTCTA
TTCCTTGTGGGTTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGCGCCGGGCGG
GCGCTGGCTCCGGTCATGTTCCGCGCACAGCTCAATGAGCAGGATATACCGCTTTCACTAACCGTGGTCGGCATTGCACC
GGAAGAACTGTCTGCATGGGCTGGTGCGGACGCCGAACGCCTGACCGTTACGGCTCTGCCAGCCATTACCACTTATGGCG
AACCGGAAGGGAACCTGCTAACAGGGCCGTGGCAGCCTCGTGTCAGCTACCGAAAACAGTGGGCGCGCTGGCGGGTGATG
ATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGTAGTGGAACGGGGCGTGACGTTATGGAGCGTCAGCGAACAGGTGGC
GCAAAGCCGCACCCAGTCGGAGAAACAGTTCTTAACGCTATTCCCGGAGCAGAAGCGGATTGTGAATTTACGCTCTCAGG
TGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCAGAATTGTCAGCGATCGCCAGTACC
CTGAAATCAGCGTCACTTACCGACATCGAAATGCGTGGTTTCACCTTTGATCAAAAACGCCAGACGCTTCACCTCCAGCT
ACGGGCTGCGAACTTTGCCAGCTTCGACAAACTGCGTAGCGCACTGGCGGCAGATTATGTTGTGCAACAGGACGCGTTAC
AGAAAGAGGGTGATGCGGTTTCCGGCGGAGTAACGTTGCGGAGGAAATAA

Protein sequence :
MLEIFFPLCAADPIRWQRHTPDVEHGIWPDVADERLQQWLQTDAIRLYIPGEWISVWQVELPDVPRKQIPTILPALLEEE
LNQDIDELHFAPLKIDQQLATVAVIHQQHMRNIAQWLQANGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWSAGR
ALAPVMFRAQLNEQDIPLSLTVVGIAPEELSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVM
ILPILLILVALVVERGVTLWSVSEQVAQSRTQSEKQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIAST
LKSASLTDIEMRGFTFDQKRQTLHLQLRAANFASFDKLRSALAADYVVQQDALQKEGDAVSGGVTLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 2e-120 98
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 5e-167 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspL YP_002330711.1 GspL-like protein VFG2055 Protein 3e-119 97