Gene Information

Name : E2348C_3236 (E2348C_3236)
Accession : YP_002330706.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Unknown
Product : transposase Orf1 of IS682
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 3364189 - 3364614 bp
Length : 426 bp
Strand : +
Note : -

DNA sequence :
ATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTATGGTTGAACTGGCATC
ACAACCTGGAGCTTGTGTTACACAGATTGCACGAGAAAATGGCGTCAATGATAATGTTATTTTCAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAA
ATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCACTTCCACTCAGACCAGAGTCAGTGC
CAGTTCCTGCAAGGTGGAATTCCGTCACGGTAACATGACGCTGGAAAATCCATCGCCAGAGCTGCTCACGATGTTAATCC
GCGAACTGAGCGGGAGGGGAAGATGA

Protein sequence :
MELQDWRKEPRKKYSNEFKLRMVELASQPGACVTQIARENGVNDNVIFKWLRLWQNEGHVSRRLPVTTSSDTGVELLPVE
ITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMTLENPSPELLTMLIRELSGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 4e-62 99
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 1e-56 89
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 5e-56 88
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 2e-44 87
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 9e-48 79
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 9e-48 79
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 4e-45 74
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 2e-31 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
E2348C_3236 YP_002330706.1 transposase Orf1 of IS682 VFG1672 Protein 1e-44 87
E2348C_3236 YP_002330706.1 transposase Orf1 of IS682 VFG1666 Protein 2e-45 74
E2348C_3236 YP_002330706.1 transposase Orf1 of IS682 VFG1738 Protein 5e-32 53