Gene Information

Name : umuD (E2348C_1302)
Accession : YP_002328842.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Unknown
Product : DNA polymerase V subunit UmuD
Function : -
COG functional category : K : Transcription
COG ID : COG1974
EC number : -
Position : 1337336 - 1337755 bp
Length : 420 bp
Strand : +
Note : binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization

DNA sequence :
ATGTTGTTTATCAAGCCTGCGGATCTCCGCGAAATTGTGACTTTTCCGCTATTTAGCGATCTTGTTCAGTGTGGCTTTCC
TTCACCGGCCGCAGATTACGTTGAACAGCGTATCGATCTGAATCAACTGTTGATCCAGCATCCCAGCGCGACTTATTTCG
TCAAAGCAAGTGGTGATTCTATGATTGATGGTGGGATTAGTGACGGTGATTTACTGATTGTCGATAGCGCTATTACCGCC
AGCCATGGTGATATTATCATCGCTGCTGTTGACGACGAGTTTACGGTGAAAAAATTGCAACTACGCCCGACGGTACAGCT
TATTCCTATGAACAGTGCGTACTCGCCCATTACCATCAGTAGCGAAGATACGCTGGATGTCTTTGGTGTGGTGATCCACG
TCGTTAAGGCGATGCGCTGA

Protein sequence :
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA
SHGDIIIAAVDDEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t06650 YP_006892470.1 hypothetical protein Not tested SPI-7 Protein 7e-18 53
unnamed ABR13390.1 hypothetical protein Not tested PAGI-5 Protein 2e-10 46
rulA CAI36138.1 SOS-response transcriptional repressor Not tested PPHGI-1 Protein 4e-09 41