Gene Information

Name : E2348C_1118 (E2348C_1118)
Accession : YP_002328668.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1178509 - 1178883 bp
Length : 375 bp
Strand : +
Note : -

DNA sequence :
GTGTCAGACAAACTCTCCGGGATAACTCATCCCGATGACAATCACGACCGCCCCTGGTGGGGGCTTCCCTGCACAGTGAG
GCCCTGTTTTGGCGCTCGTCTGGTGCAAGAGGGTAACCGCCTGCATTACCTTGCTGACCGCGCCGGTATCAGAGGCCGCT
TCAGCGACGCAGATGCATACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGATATCAGCATACCGTCACGCTGTATGCAAAAGGGCTGACCTGCGAAGCCGACACCCTCGGCTCCTG
TGGTTACGTTTATCTGGCTGTTTATCCGACACCAGCACCCGCAACCACCTCATAA

Protein sequence :
MSDKLSGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRYQHTVTLYAKGLTCEADTLGSCGYVYLAVYPTPAPATTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1220 NP_286755.1 structural protein Not tested TAI Protein 4e-54 99
Z1658 NP_287161.1 structural protein Not tested TAI Protein 4e-54 99
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 2e-52 98
unnamed AAL08477.1 unknown Not tested SRL Protein 1e-53 97
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 1e-49 92
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 4e-48 92
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-49 92
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 4e-49 92
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 7e-51 91
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 7e-51 91
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 3e-47 91
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-48 91
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-51 91
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-51 91
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 1e-49 91
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 1e-50 90
unnamed AAL57576.1 unknown Not tested LEE Protein 7e-49 90
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 8e-48 88
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-48 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
E2348C_1118 YP_002328668.1 hypothetical protein VFG1068 Protein 4e-54 97
E2348C_1118 YP_002328668.1 hypothetical protein VFG1619 Protein 6e-50 92
E2348C_1118 YP_002328668.1 hypothetical protein VFG0662 Protein 2e-51 91
E2348C_1118 YP_002328668.1 hypothetical protein VFG1681 Protein 1e-47 91