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Name : ABBFA_000394 (ABBFA_000394) Accession : YP_002324327.1 Strain : Acinetobacter baumannii AB307-0294 Genome accession: NC_011595 Putative virulence/resistance : Resistance Product : Tetracycline resistance protein, class A (TetA(A)) Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 424342 - 425526 bp Length : 1185 bp Strand : + Note : [GEPR] COG0477 Permeases of the major facilitator superfamily DNA sequence : ATGAATCGATCTCTATTTATTATCTTTGCAACTATTGCTTTAGATGCTATTGGTATCGGTCTTATTTTTCCGATTCTTCC TTTATTATTACAAGATATGACGCATAGCACTCATATTTCTATATATATGGGTATATTGGCCAGTCTCTATGCGGCCATGC AATTTATCTTCTCTCCTTTATTAGGTGCGTTAAGTGACAGATGGGGGCGTAGACCGGTCTTGCTTATTTCACTGGCTGGG TCAGCAGTTAATTATCTCTTTCTAACTTTTTCACATAGCCTAATTTTATTGCTAGTAGGTCGCATTATTGCTGGAATCAC CAGTGCCAACATGGCTGTTGCAAGTGCTTATATTGTCGATGTTTTGCACGAAAATAACCGCGCAAAATATTTTGGTTTAA TCAATGCTATGTTTGGTGCAGGCTTCATTATTGGCCCTGTATTGGGCGGATTCTTGAGTGAATATGGATTAAGACTTCCT TTCTTTGCGGCAGCTATATTGACAGGGCTTAATCTTTTATCTGCCTATTTTGTTTTGCCTGAATCCCGAAAAGTGACTTT GGAGAACAAACAATTATCTACATTAAACCCTTTTAAAATATTTGCTGGTATTAGCTCTATTCGTGGTGTACTTCCACTTA TTACGACCTTTTTTATCTTTAGTGCCATAGGGGAGGTATATGGAGTCTGCTGGGCATTATGGGGACATGACACATTTCAG TGGAGCGGTTTCTGGGTAGGTCTTTCTCTAGGCGCATTTGGTCTATGTCAAATGCTGGTACAGGCTCTTATTCCGAGTCA TGCTTCAAGATTGCTGGGTAATCGTAATGCTGTGCTGGCTGGTATTGCTTGTTCTTGTTTTGCTTTAGCAGTAATGGCTT TCGCCCAAAGTGGTTGGATGATTTTTGCTATTATGCCTATTTTTGCGCTAGGGAGTATGGGGACACCTTCATTACAAGCC TTAGCTTCTCAAAAGGTTTCTGCTGACCAGCAAGGACAGTTTCAGGGAGTGATAGCATCTACGGTAAGTATGGCCTCTAT GATTGCCCCTATGTTTTTCTCCACTCTTTATTTTCAGTTTCAGGAAAAATGGCCGGGAGCAATTTGGTTGAGCGTGATTT TGATTTACCTGCTCACCTTACCGATCATTTTGTATAGTACCCGACCAGTCGTACAACAAAGATAG Protein sequence : MNRSLFIIFATIALDAIGIGLIFPILPLLLQDMTHSTHISIYMGILASLYAAMQFIFSPLLGALSDRWGRRPVLLISLAG SAVNYLFLTFSHSLILLLVGRIIAGITSANMAVASAYIVDVLHENNRAKYFGLINAMFGAGFIIGPVLGGFLSEYGLRLP FFAAAILTGLNLLSAYFVLPESRKVTLENKQLSTLNPFKIFAGISSIRGVLPLITTFFIFSAIGEVYGVCWALWGHDTFQ WSGFWVGLSLGAFGLCQMLVQALIPSHASRLLGNRNAVLAGIACSCFALAVMAFAQSGWMIFAIMPIFALGSMGTPSLQA LASQKVSADQQGQFQGVIASTVSMASMIAPMFFSTLYFQFQEKWPGAIWLSVILIYLLTLPIILYSTRPVVQQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 9e-61 | 45 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 7e-61 | 45 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 7e-61 | 45 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 7e-61 | 45 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 6e-61 | 45 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 4e-61 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | NC_011595.7059241.p0 | Protein | 8e-164 | 100 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | NC_010410.6003291.p0 | Protein | 1e-163 | 100 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | NC_011586.7043399.p0 | Protein | 3e-163 | 99 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | NC_009085.4918440.p0 | Protein | 3e-151 | 96 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | AF090987.gene.p01 | Protein | 1e-61 | 47 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | AY264780.2.gene3.p01 | Protein | 2e-69 | 46 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | CP001485.1.gene2821. | Protein | 3e-61 | 45 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | AF534183.gene.p01 | Protein | 3e-61 | 45 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | NC_010410.6002597.p0 | Protein | 3e-61 | 45 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | Y19114.gene.p01 | Protein | 1e-60 | 44 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | X75761.gene.p01 | Protein | 2e-59 | 44 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | AY743590.gene.p01 | Protein | 6e-65 | 43 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | NC_011586.7045189.p0 | Protein | 3e-58 | 43 |
| ABBFA_000394 | YP_002324327.1 | Tetracycline resistance protein, class A (TetA(A)) | AF133139.gene.p01 | Protein | 2e-53 | 41 |
