Gene Information

Name : ABBFA_003458 (ABBFA_003458)
Accession : YP_002327330.1
Strain : Acinetobacter baumannii AB307-0294
Genome accession: NC_011595
Putative virulence/resistance : Virulence
Product : protein capL
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 3685084 - 3686358 bp
Length : 1275 bp
Strand : -
Note : [M] COG1004 Predicted UDP-glucose 6-dehydrogenase

DNA sequence :
ATGCAACTTGCCGATTTAAGAATAGCGATTATAGGTTTAGGTTATGTAGGCTTGCCATTGGCCGTTGAGTTTGGGAAAAA
AGTACCTGTAGTCGGTTTTGATATCTATCAAAAACGTATAAGTGAATTAAAAAGTGGTCAAGATCACACTTTAGAAGTTT
CACCAGAAGAATTAAAACAAGCAGCTCAATTAAGCTATACTACAAATTTAGAAGATCTAAAAGATTGTAATTTTTTTATT
GTCACTGTTCCAACTCCAATTGATAACTATAAGCAGCCAGATTTAACACCTTTGGTTAAAGCTTCTACTAGTATTGGTAA
AATTCTAAAAAAAGGTGATATTGTCGTATATGAGTCGACTGTTTATCCAGGTGCTACAGAAGAAGTTTGTATTCCTGTAC
TCGAAGAAGTTTCAGGTTTAACGTTTAATAAAGATTTCTATGCTGGCTATAGTCCAGAACGTATTAATCCTGGCGATAAA
CTTCACCGTGTTACTAATATTTTGAAAATTACCTCAGGTTCGACACCAGAAATTTCTGAGTTTATTGATGAAGTTTATAA
TTTAATTATTGAGGCTGGAACTCATAAGGCACCTAGTATTAAGGTTGCTGAAGCGGCCAAGGTTATTGAAAATACACAAC
GTGATGTCAATATTGCGCTTATTAATGAATTAGCACTTATTTTTAATAAATTAGGTATAGATACAGAAGATGTATTGAAA
GCAGCGGGTACTAAATGGAATTTTTTACCATTCCGTCCCGGTCTGGTAGGAGGTCACTGTATCGGAGTTGATCCATATTA
TTTAACTCATAAAGCTCAAGCGATTGGATATCACCCAGAAATTATTTTAGCAGGGCGTCGATTGAATGATTCAATGGGAG
CATATGTTGTTACTCAACTTGTAAAGGGAATGATAAAAAAGAAAATTCAAGTTGAAGGAGCTAAGGTTTTAGTATTGGGT
TTAAGCTTTAAAGAAAATTGCCCTGATATTCGTAATACAAAAGTTATCGATATTGTAAAAGAACTACAAGAATATCATAT
GGATGTTGATGTATATGATCCTTGGATTGATAGTGAAGAAACTCAACACGAATATGGTATTACACCAGTTAAGCAACCTA
CAGCAGGTCAATATGATGCTGTAATATTAGCAGTTGCTCATAACGAATTTAAAGAAATGGGTATAGAGGCAATTCGCTCT
TTAGGTAAAACATCGCATGTACTTTATGATCTGAAATATGTTTTAGCTCAATCTGAATCAGATATCCGTCTATAA

Protein sequence :
MQLADLRIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRISELKSGQDHTLEVSPEELKQAAQLSYTTNLEDLKDCNFFI
VTVPTPIDNYKQPDLTPLVKASTSIGKILKKGDIVVYESTVYPGATEEVCIPVLEEVSGLTFNKDFYAGYSPERINPGDK
LHRVTNILKITSGSTPEISEFIDEVYNLIIEAGTHKAPSIKVAEAAKVIENTQRDVNIALINELALIFNKLGIDTEDVLK
AAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGAYVVTQLVKGMIKKKIQVEGAKVLVLG
LSFKENCPDIRNTKVIDIVKELQEYHMDVDVYDPWIDSEETQHEYGITPVKQPTAGQYDAVILAVAHNEFKEMGIEAIRS
LGKTSHVLYDLKYVLAQSESDIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-149 70
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-149 70
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-114 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABBFA_003458 YP_002327330.1 protein capL VFG0431 Protein 8e-150 70