Gene Information

Name : ABBFA_003457 (ABBFA_003457)
Accession : YP_002327329.1
Strain : Acinetobacter baumannii AB307-0294
Genome accession: NC_011595
Putative virulence/resistance : Virulence
Product : Vi polysaccharide biosynthesis protein vipB/tviC
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 3684038 - 3685060 bp
Length : 1023 bp
Strand : -
Note : [MG] COG0451 Nucleoside-diphosphate-sugar epimerases

DNA sequence : 
ATGAATCGCTATGAAGAAGTATTGGAGCAGCTTAATAGCAATCCTAAAACATGGTTAATAACGGGTGTTGCGGGTTTTAT
TGGATCAAATCTGTTAGAAACTCTATTAAAATTAAATCAAAATGTAATTGGCTTAGACAACTTTGCTACAGGTCATCAAT
ATAATCTGGATGAAGTAGAGACTTTAGTGAGCAGTGACCAATGGAAGAATTTTACTTTCTATAATGGTGACATTCGTAAC
TTAGAGGATTGTCAGAAGGCATGCGCTAACGTTGACTATGTTTTACATCAAGCCGCTCTTGGTTCTGTTCCACGTTCAAT
TGCTGATCCAATATTGACAAATAGTGCCAATATTACGGGTTTTTTAAATATGCTCGTTGCAGCAAGAGACGCTCAAGTCA
AAAGTTTTACTTATGCTGCGAGTAGCTCTACATATGGTGACCACCCGGCGTTACCAAAAGTAGAAGAAAATATTGGTAAT
CCATTATCTCCTTATGCGGTAACTAAGTATGTAAATGAGCTTTATGCTGAAGTTTTTGCTCGTACATATGGTTTTAAAGC
AATAGGTTTGCGCTATTTTAATGTGTTTGGTAAACGTCAAGATCCTAATGGAGCTTATGCTGCAGTTATTCCAAAATGGA
CAGCAGCTATGATTCAAGGAGACGATGTATTTATTAATGGCGATGGCGAGACCAGTCGTGATTTTTGTTATATCGAAAAT
ACAGTACAAGCCAATATTTTAGCAGCTGTAGCAAATGATGAAGCTAAAAATCAAGTCTATAATGTGGCGGTAGGAGATAG
AACTACCCTAAATGATTTATTTAAGGCTATTAAATCTGCTTTGAAAGAAAATGGAATTTCTTATGACAAAGAACCTGTTT
ATCGTGAATTTAGAGCTGGTGATGTAAGGCATTCTCAAGCAGATGTAACTAAAATCAAAACATTACTAGGATATGATCCA
AAATTTAGAATTTTTGAAGGTATCTCACAAGCAATGGTCTGGTATAAGCATTTCTTAAATTAA

Protein sequence : 
MNRYEEVLEQLNSNPKTWLITGVAGFIGSNLLETLLKLNQNVIGLDNFATGHQYNLDEVETLVSSDQWKNFTFYNGDIRN
LEDCQKACANVDYVLHQAALGSVPRSIADPILTNSANITGFLNMLVAARDAQVKSFTYAASSSTYGDHPALPKVEENIGN
PLSPYAVTKYVNELYAEVFARTYGFKAIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQGDDVFINGDGETSRDFCYIEN
TVQANILAAVANDEAKNQVYNVAVGDRTTLNDLFKAIKSALKENGISYDKEPVYREFRAGDVRHSQADVTKIKTLLGYDP
KFRIFEGISQAMVWYKHFLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-110 69
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-110 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABBFA_003457 YP_002327329.1 Vi polysaccharide biosynthesis protein vipB/tviC VFG0430 Protein 1e-110 69